Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Limch1Q3UH68 Gm23747-201ENSMUST00000104228 131 ntBASIC3.82□□□□□ -1.8
Limch1Q3UH68 Gm23202-201ENSMUST00000104376 129 ntBASIC3.82□□□□□ -1.8
Limch1Q3UH68 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Limch1Q3UH68 Gm23791-201ENSMUST00000122553 293 ntBASIC3.82□□□□□ -1.8
Limch1Q3UH68 Gm37085-201ENSMUST00000193780 196 ntBASIC3.82□□□□□ -1.8
Limch1Q3UH68 Gm25814-201ENSMUST00000082754 107 ntBASIC3.82□□□□□ -1.8
Limch1Q3UH68 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Limch1Q3UH68 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Limch1Q3UH68 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Limch1Q3UH68 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Limch1Q3UH68 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Limch1Q3UH68 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Limch1Q3UH68 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Limch1Q3UH68 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Limch1Q3UH68 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm26293-201ENSMUST00000104170 84 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm25308-201ENSMUST00000104171 158 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm26423-201ENSMUST00000104277 128 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm26249-201ENSMUST00000116708 118 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm25961-201ENSMUST00000157174 135 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm7592-201ENSMUST00000160674 627 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm22192-201ENSMUST00000175128 85 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Mir5136-201ENSMUST00000175573 76 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm28002-201ENSMUST00000184832 100 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm43991-201ENSMUST00000203751 274 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm45116-201ENSMUST00000207392 275 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm25632-201ENSMUST00000083112 85 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm23850-201ENSMUST00000083830 169 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.81□□□□□ -1.8
Limch1Q3UH68 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Limch1Q3UH68 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Limch1Q3UH68 Snord14c-201ENSMUST00000101927 86 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 Gm22713-201ENSMUST00000116895 130 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 Gm25267-201ENSMUST00000158522 63 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 Gm27793-201ENSMUST00000183405 76 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Limch1Q3UH68 Gm24148-201ENSMUST00000082762 80 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Limch1Q3UH68 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.8□□□□□ -1.8
Limch1Q3UH68 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Limch1Q3UH68 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Limch1Q3UH68 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Limch1Q3UH68 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Limch1Q3UH68 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.79□□□□□ -1.8
Limch1Q3UH68 Gm22051-201ENSMUST00000117002 127 ntBASIC3.79□□□□□ -1.8
Limch1Q3UH68 Gm12351-201ENSMUST00000118727 292 ntBASIC3.79□□□□□ -1.8
Limch1Q3UH68 Gm22532-201ENSMUST00000158822 140 ntBASIC3.79□□□□□ -1.8
Limch1Q3UH68 Mir6399-201ENSMUST00000184050 84 ntBASIC3.79□□□□□ -1.8
Limch1Q3UH68 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.79□□□□□ -1.8
Limch1Q3UH68 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.79□□□□□ -1.8
Limch1Q3UH68 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm24283-201ENSMUST00000104233 107 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm11786-201ENSMUST00000120799 155 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm24440-201ENSMUST00000157236 63 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm24846-201ENSMUST00000158033 108 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm24512-201ENSMUST00000174963 65 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm17522-201ENSMUST00000178144 498 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm9370-201ENSMUST00000222787 609 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm22248-201ENSMUST00000082482 150 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm22507-201ENSMUST00000082773 160 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Gm22421-201ENSMUST00000083058 107 ntBASIC3.78□□□□□ -1.8
Limch1Q3UH68 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Limch1Q3UH68 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Limch1Q3UH68 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm13443-201ENSMUST00000120770 555 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm23559-201ENSMUST00000157824 103 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm16546-201ENSMUST00000159442 355 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Mir7667-201ENSMUST00000183866 63 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm20058-201ENSMUST00000186939 284 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm29553-201ENSMUST00000189692 279 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm37290-201ENSMUST00000195775 339 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm43899-201ENSMUST00000203675 246 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm45445-201ENSMUST00000209586 232 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm25142-201ENSMUST00000082698 107 ntBASIC3.77□□□□□ -1.81
Limch1Q3UH68 Gm10212-201ENSMUST00000087884 324 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 124.6 ms