Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm7240-201ENSMUST00000220769 664 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Mir93-201ENSMUST00000083593 88 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm22494-201ENSMUST00000104495 128 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm14307-201ENSMUST00000118930 291 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm11254-201ENSMUST00000122368 653 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm14297-201ENSMUST00000129110 291 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm25625-201ENSMUST00000157221 96 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm24005-201ENSMUST00000158459 296 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm25051-201ENSMUST00000158602 249 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm22527-201ENSMUST00000158816 106 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm24656-201ENSMUST00000177548 132 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm25121-201ENSMUST00000179846 79 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Mir6346-201ENSMUST00000183982 81 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Mir6905-201ENSMUST00000184228 70 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm37579-201ENSMUST00000194291 142 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm44533-201ENSMUST00000207782 268 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm45673-201ENSMUST00000210293 358 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Snord42a-201ENSMUST00000082606 65 ntBASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trafd1Q3UDK1 Gm24049-201ENSMUST00000102409 100 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Mdga2-203ENSMUST00000113942 423 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm13672-201ENSMUST00000117554 459 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm14980-201ENSMUST00000121247 736 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm22843-201ENSMUST00000157710 134 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm25457-201ENSMUST00000179509 107 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Mir6399-201ENSMUST00000184050 84 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm44337-201ENSMUST00000196553 114 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Mir7021-201ENSMUST00000197026 63 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm45296-201ENSMUST00000209625 205 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm23377-201ENSMUST00000082943 126 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm25896-201ENSMUST00000083713 136 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm23731-201ENSMUST00000083749 107 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm25651-201ENSMUST00000083782 119 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Mir496a-201ENSMUST00000093627 79 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.86□□□□□ -2.11
Trafd1Q3UDK1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm24282-201ENSMUST00000104232 66 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm23469-201ENSMUST00000157131 104 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm25113-201ENSMUST00000157185 143 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm23043-201ENSMUST00000157890 109 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm24304-201ENSMUST00000177635 107 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm24388-201ENSMUST00000177872 107 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm24487-201ENSMUST00000178017 63 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm25671-201ENSMUST00000178612 105 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm23307-201ENSMUST00000179167 105 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm25286-201ENSMUST00000179790 105 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Mir6355-201ENSMUST00000183687 106 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Mir6951-201ENSMUST00000183910 75 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Mir7225-201ENSMUST00000184178 54 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm28627-201ENSMUST00000186141 453 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm37404-201ENSMUST00000195726 359 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm44024-201ENSMUST00000203008 476 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Gm23041-201ENSMUST00000083868 106 ntBASIC1.85□□□□□ -2.11
Trafd1Q3UDK1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm25543-201ENSMUST00000122678 312 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm22491-201ENSMUST00000157190 102 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm23120-201ENSMUST00000157654 287 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm25836-201ENSMUST00000158918 123 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm20462-201ENSMUST00000172623 408 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm28418-201ENSMUST00000186179 423 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm43427-201ENSMUST00000198188 331 ntBASIC1.84□□□□□ -2.11
Trafd1Q3UDK1 Gm45654-201ENSMUST00000210980 123 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms