Protein–RNA interactions for Protein: Q3TKT4

Smarca4, Transcription activator BRG1, mousemouse

Known RBP Predictions only

Length 1,613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca4Q3TKT4 Gm9156-201ENSMUST00000189660 463 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm42647-201ENSMUST00000195939 459 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm45439-201ENSMUST00000211723 359 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm25876-201ENSMUST00000104329 119 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm12806-201ENSMUST00000119384 268 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm23114-201ENSMUST00000158478 117 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm27545-201ENSMUST00000184755 202 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm37319-201ENSMUST00000193500 636 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 Gm44865-201ENSMUST00000207240 531 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.2□□□□□ -2.38
Smarca4Q3TKT4 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm16186-201ENSMUST00000120132 216 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm12045-201ENSMUST00000122122 573 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm22675-201ENSMUST00000158430 104 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm26365-201ENSMUST00000179177 94 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm37693-201ENSMUST00000194562 234 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm9236-201ENSMUST00000196892 587 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.19□□□□□ -2.38
Smarca4Q3TKT4 Gm14937-201ENSMUST00000119709 208 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm24480-201ENSMUST00000157442 103 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm23586-201ENSMUST00000157657 123 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm24668-201ENSMUST00000158935 104 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm23419-201ENSMUST00000175523 84 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm22510-201ENSMUST00000179304 79 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm26336-201ENSMUST00000179449 79 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm26390-201ENSMUST00000179628 79 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm37599-201ENSMUST00000193067 489 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm44976-201ENSMUST00000205543 261 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm45374-201ENSMUST00000211388 136 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm23645-201ENSMUST00000083228 108 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Gm23042-201ENSMUST00000083866 101 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.18□□□□□ -2.38
Smarca4Q3TKT4 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm13396-201ENSMUST00000120617 271 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm23206-201ENSMUST00000122720 184 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm27861-201ENSMUST00000183920 214 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Mir6335-201ENSMUST00000184081 98 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm37089-201ENSMUST00000195616 129 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm44326-201ENSMUST00000198226 101 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm18703-201ENSMUST00000215318 333 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 AC152979.4-201ENSMUST00000219893 379 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm25802-201ENSMUST00000082639 77 ntBASIC0.17□□□□□ -2.38
Smarca4Q3TKT4 Gm22757-201ENSMUST00000102279 96 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm25378-201ENSMUST00000104333 129 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm12304-201ENSMUST00000120312 385 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm25543-201ENSMUST00000122678 312 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm25393-201ENSMUST00000157336 285 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm8114-201ENSMUST00000172225 484 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm43035-201ENSMUST00000197626 517 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm45912-201ENSMUST00000210646 543 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm25650-201ENSMUST00000083784 162 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm11575-201ENSMUST00000122243 228 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm23106-201ENSMUST00000157554 101 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm26000-201ENSMUST00000157991 107 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm20415-201ENSMUST00000172877 423 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Mir15a-201ENSMUST00000175266 84 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Gm20613-201ENSMUST00000175828 345 ntBASIC0.16□□□□□ -2.38
Smarca4Q3TKT4 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms