Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Mir669b-201ENSMUST00000102172 97 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm25765-201ENSMUST00000104100 132 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm14282-201ENSMUST00000119484 240 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm14551-201ENSMUST00000120802 256 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm2830-201ENSMUST00000140330 385 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm25220-201ENSMUST00000157546 95 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm24730-201ENSMUST00000158228 117 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm24213-201ENSMUST00000158255 258 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm25436-201ENSMUST00000158275 145 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm22139-201ENSMUST00000158747 105 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm24799-201ENSMUST00000178431 79 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm37239-201ENSMUST00000193510 141 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm29704-201ENSMUST00000196011 253 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm43955-201ENSMUST00000204332 142 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm45445-201ENSMUST00000209586 232 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm45420-201ENSMUST00000211243 425 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm24152-201ENSMUST00000082764 163 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Snord104-201ENSMUST00000083192 70 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Snord15a-201ENSMUST00000083888 148 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3□□□□□ -1.93
Ccbe1Q3MI99 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccbe1Q3MI99 Gm37479-201ENSMUST00000194169 3841 ntBASIC3□□□□□ -1.93
Ccbe1Q3MI99 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ccbe1Q3MI99 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm14602-201ENSMUST00000118625 340 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm15183-201ENSMUST00000118933 348 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm22840-201ENSMUST00000158444 136 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm29452-201ENSMUST00000187996 313 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm44182-201ENSMUST00000204052 115 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm44478-201ENSMUST00000204875 114 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm23736-201ENSMUST00000082553 75 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm23738-201ENSMUST00000082828 171 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm23042-201ENSMUST00000083866 101 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Gm25630-201ENSMUST00000084000 162 ntBASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccbe1Q3MI99 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Mir450b-201ENSMUST00000102095 82 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm24126-201ENSMUST00000104111 106 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm22151-201ENSMUST00000116963 58 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm13076-201ENSMUST00000118041 204 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm25805-201ENSMUST00000122788 108 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm24916-201ENSMUST00000157287 79 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm26403-201ENSMUST00000158500 105 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm27392-201ENSMUST00000185041 101 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm29308-201ENSMUST00000188863 315 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm28537-201ENSMUST00000189026 315 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm29631-201ENSMUST00000191065 315 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm42988-201ENSMUST00000198116 225 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm24147-201ENSMUST00000082763 144 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Mir208a-201ENSMUST00000083498 83 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.98□□□□□ -1.93
Ccbe1Q3MI99 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm11982-201ENSMUST00000121480 314 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm22845-201ENSMUST00000157712 104 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm23260-201ENSMUST00000158317 172 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm22943-201ENSMUST00000158564 76 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm22775-201ENSMUST00000177630 120 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm23569-201ENSMUST00000180120 120 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm44338-201ENSMUST00000198614 110 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm46233-201ENSMUST00000217831 449 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.97□□□□□ -1.93
Ccbe1Q3MI99 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Mir673-201ENSMUST00000102361 91 ntBASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Gm22115-201ENSMUST00000103976 133 ntBASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Gm23923-201ENSMUST00000104108 133 ntBASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Mdga2-203ENSMUST00000113942 423 ntBASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Gm13343-201ENSMUST00000116474 105 ntBASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Gm12793-201ENSMUST00000119268 292 ntBASIC2.96□□□□□ -1.94
Ccbe1Q3MI99 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms