Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Gm26348-201ENSMUST00000157528 240 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Gm22598-201ENSMUST00000157600 127 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Gm24191-201ENSMUST00000157977 122 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Gm23342-201ENSMUST00000158958 115 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Gm27580-201ENSMUST00000183666 149 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Gm27285-201ENSMUST00000183875 127 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.29□□□□□ -1.88
Shroom4Q1W617 Gm18341-201ENSMUST00000197538 622 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.29□□□□□ -1.88
Shroom4Q1W617 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm13396-201ENSMUST00000120617 271 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm6059-201ENSMUST00000196903 340 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm10038-201ENSMUST00000077233 441 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm26204-201ENSMUST00000082906 107 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Mir200b-201ENSMUST00000083615 70 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shroom4Q1W617 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm13876-201ENSMUST00000118451 261 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm24629-201ENSMUST00000122762 89 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm22212-201ENSMUST00000158096 106 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Mir3112-201ENSMUST00000175431 82 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Mir9-3-201ENSMUST00000175497 90 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm37162-201ENSMUST00000191708 551 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm5002-201ENSMUST00000207145 223 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm44825-201ENSMUST00000207557 150 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm44598-201ENSMUST00000207566 150 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm45815-201ENSMUST00000220241 146 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.28□□□□□ -1.88
Shroom4Q1W617 Gm2962-201ENSMUST00000159266 336 ntBASIC3.27□□□□□ -1.89
Shroom4Q1W617 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shroom4Q1W617 Mir8103-201ENSMUST00000183945 107 ntBASIC3.27□□□□□ -1.89
Shroom4Q1W617 Gm27545-201ENSMUST00000184755 202 ntBASIC3.27□□□□□ -1.89
Shroom4Q1W617 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.27□□□□□ -1.89
Shroom4Q1W617 Mir691-201ENSMUST00000199719 78 ntBASIC3.27□□□□□ -1.89
Shroom4Q1W617 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shroom4Q1W617 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.27□□□□□ -1.89
Shroom4Q1W617 Gm26128-201ENSMUST00000083170 110 ntBASIC3.27□□□□□ -1.89
Shroom4Q1W617 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Shroom4Q1W617 Gm19194-201ENSMUST00000192015 3774 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Shroom4Q1W617 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Shroom4Q1W617 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm14591-201ENSMUST00000120407 518 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm11849-201ENSMUST00000121293 261 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm24005-201ENSMUST00000158459 296 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm28288-201ENSMUST00000191019 214 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm43991-201ENSMUST00000203751 274 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.26□□□□□ -1.89
Shroom4Q1W617 AC129085.5-201ENSMUST00000225468 400 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm5899-201ENSMUST00000071770 270 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.26□□□□□ -1.89
Shroom4Q1W617 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Shroom4Q1W617 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.26□□□□□ -1.89
Shroom4Q1W617 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm25875-201ENSMUST00000104323 107 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm14846-201ENSMUST00000121868 216 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm25599-201ENSMUST00000157816 103 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm17052-201ENSMUST00000165496 289 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm3851-201ENSMUST00000168653 318 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm27718-201ENSMUST00000183721 86 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm5329-201ENSMUST00000186898 463 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm24661-201ENSMUST00000083205 104 ntBASIC3.25□□□□□ -1.89
Shroom4Q1W617 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shroom4Q1W617 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shroom4Q1W617 Gm6897-201ENSMUST00000117714 138 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm14758-201ENSMUST00000119104 138 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm6829-201ENSMUST00000119858 360 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm25914-201ENSMUST00000157618 153 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm24264-201ENSMUST00000179835 94 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm28163-201ENSMUST00000187099 325 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm29167-201ENSMUST00000190024 377 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm18540-201ENSMUST00000204025 526 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm18188-201ENSMUST00000219386 478 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm22304-201ENSMUST00000082688 129 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.24□□□□□ -1.89
Shroom4Q1W617 Gm28020-201ENSMUST00000157739 67 ntBASIC3.23□□□□□ -1.89
Shroom4Q1W617 Gm26291-201ENSMUST00000158889 137 ntBASIC3.23□□□□□ -1.89
Shroom4Q1W617 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shroom4Q1W617 Gm25935-201ENSMUST00000178746 107 ntBASIC3.23□□□□□ -1.89
Shroom4Q1W617 Mir6352-201ENSMUST00000184495 116 ntBASIC3.23□□□□□ -1.89
Shroom4Q1W617 Gm28849-201ENSMUST00000188127 174 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms