Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm11798-201ENSMUST00000119150 421 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm24192-201ENSMUST00000157978 145 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm22113-201ENSMUST00000158343 104 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm17100-201ENSMUST00000168963 272 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm26914-201ENSMUST00000182262 223 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm27410-201ENSMUST00000183851 115 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm27878-201ENSMUST00000184000 106 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm27544-201ENSMUST00000185069 155 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm43676-201ENSMUST00000197532 540 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm43505-201ENSMUST00000200579 139 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm43578-201ENSMUST00000201250 459 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Snord68-201ENSMUST00000082516 86 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm26126-201ENSMUST00000083188 164 ntBASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ptchd3Q0EEE2 Gm26342-201ENSMUST00000104557 129 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Gm25982-201ENSMUST00000157920 101 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Gm25642-201ENSMUST00000175137 66 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Mir7068-201ENSMUST00000183439 74 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Mir6950-201ENSMUST00000184438 73 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Gm28848-201ENSMUST00000189984 168 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Snord43-201ENSMUST00000199549 108 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Gm23404-201ENSMUST00000082543 97 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Mir107-201ENSMUST00000083660 87 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.89□□□□□ -2.11
Ptchd3Q0EEE2 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm23551-201ENSMUST00000116852 121 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm25113-201ENSMUST00000157185 143 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm24504-201ENSMUST00000157679 100 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Mir28b-201ENSMUST00000175399 80 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm21827-201ENSMUST00000178247 423 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm23793-201ENSMUST00000179396 117 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Mir6995-201ENSMUST00000183658 71 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm44564-201ENSMUST00000207985 180 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Snora33-201ENSMUST00000093556 129 ntBASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Ptchd3Q0EEE2 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Mir3096-201ENSMUST00000116685 71 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm22713-201ENSMUST00000116895 130 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm13729-201ENSMUST00000120328 406 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm11786-201ENSMUST00000120799 155 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm14980-201ENSMUST00000121247 736 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm25543-201ENSMUST00000122678 312 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm25059-201ENSMUST00000157367 117 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm24480-201ENSMUST00000157442 103 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm22836-201ENSMUST00000158441 61 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm25994-201ENSMUST00000175392 101 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Mir5118-201ENSMUST00000175551 67 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm44666-201ENSMUST00000208544 391 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm25589-201ENSMUST00000082502 166 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm25929-201ENSMUST00000082784 107 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Mir151-201ENSMUST00000083678 68 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm26175-201ENSMUST00000083794 131 ntBASIC1.87□□□□□ -2.11
Ptchd3Q0EEE2 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm25094-201ENSMUST00000103992 131 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm24984-201ENSMUST00000104454 133 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm22032-201ENSMUST00000116946 116 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm13432-201ENSMUST00000118861 241 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm29229-201ENSMUST00000188874 323 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm37377-201ENSMUST00000191733 304 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Mir378a-201ENSMUST00000198300 66 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm44811-201ENSMUST00000209120 228 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Gm23731-201ENSMUST00000083749 107 ntBASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ptchd3Q0EEE2 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ptchd3Q0EEE2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ptchd3Q0EEE2 Gm25848-201ENSMUST00000116790 144 ntBASIC1.85□□□□□ -2.11
Ptchd3Q0EEE2 Gm12941-201ENSMUST00000117934 220 ntBASIC1.85□□□□□ -2.11
Ptchd3Q0EEE2 Gm15536-201ENSMUST00000121411 114 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms