Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm22678-201ENSMUST00000116974 101 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm12721-201ENSMUST00000120621 268 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm11786-201ENSMUST00000120799 155 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm25115-201ENSMUST00000157187 140 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm22259-201ENSMUST00000178926 107 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm28627-201ENSMUST00000186141 453 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm29022-201ENSMUST00000190702 225 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm2077-201ENSMUST00000195017 319 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm42774-201ENSMUST00000198854 283 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm43993-201ENSMUST00000203972 247 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm45508-201ENSMUST00000209298 299 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ssrp1Q08943 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.19□□□□□ -1.9
Ssrp1Q08943 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.18□□□□□ -1.9
Ssrp1Q08943 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ssrp1Q08943 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ssrp1Q08943 Gm12897-201ENSMUST00000120341 250 ntBASIC3.18□□□□□ -1.9
Ssrp1Q08943 Gm16111-201ENSMUST00000162128 285 ntBASIC3.18□□□□□ -1.9
Ssrp1Q08943 Gm29262-201ENSMUST00000190084 196 ntBASIC3.18□□□□□ -1.9
Ssrp1Q08943 Gm37007-201ENSMUST00000194234 319 ntBASIC3.18□□□□□ -1.9
Ssrp1Q08943 Gm43220-201ENSMUST00000199299 282 ntBASIC3.18□□□□□ -1.9
Ssrp1Q08943 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.18□□□□□ -1.9
Ssrp1Q08943 Gm25789-201ENSMUST00000083294 76 ntBASIC3.18□□□□□ -1.9
Ssrp1Q08943 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm24867-201ENSMUST00000104161 107 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm11414-201ENSMUST00000121795 263 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm24594-201ENSMUST00000122502 99 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm24787-201ENSMUST00000157380 123 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm25863-201ENSMUST00000158249 329 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm44425-201ENSMUST00000203739 429 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm18991-201ENSMUST00000209225 746 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Gm23297-201ENSMUST00000083184 127 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ssrp1Q08943 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.17□□□□□ -1.9
Ssrp1Q08943 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ssrp1Q08943 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ssrp1Q08943 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ssrp1Q08943 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Ssrp1Q08943 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm23472-201ENSMUST00000101806 191 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm25308-201ENSMUST00000104171 158 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm24480-201ENSMUST00000157442 103 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm25720-201ENSMUST00000157503 105 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm24138-201ENSMUST00000157572 114 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm23864-201ENSMUST00000177607 107 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm24497-201ENSMUST00000177868 191 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm23444-201ENSMUST00000082922 191 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm25401-201ENSMUST00000082975 106 ntBASIC3.16□□□□□ -1.9
Ssrp1Q08943 Gm25466-201ENSMUST00000103995 132 ntBASIC3.15□□□□□ -1.91
Ssrp1Q08943 Gm24982-201ENSMUST00000104456 132 ntBASIC3.15□□□□□ -1.91
Ssrp1Q08943 Gm28020-201ENSMUST00000157739 67 ntBASIC3.15□□□□□ -1.91
Ssrp1Q08943 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ssrp1Q08943 Gm27793-201ENSMUST00000183405 76 ntBASIC3.15□□□□□ -1.91
Ssrp1Q08943 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.15□□□□□ -1.91
Ssrp1Q08943 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.15□□□□□ -1.91
Ssrp1Q08943 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.15□□□□□ -1.91
Ssrp1Q08943 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ssrp1Q08943 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm24121-201ENSMUST00000102029 106 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm22497-201ENSMUST00000104499 131 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm14973-201ENSMUST00000117248 255 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm13862-201ENSMUST00000121220 197 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm23535-201ENSMUST00000157542 106 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Snord93-201ENSMUST00000175580 71 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm25253-201ENSMUST00000179958 107 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Mir6481-201ENSMUST00000184617 110 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm27753-201ENSMUST00000184742 203 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm26225-201ENSMUST00000082508 135 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Gm23246-201ENSMUST00000083371 67 ntBASIC3.14□□□□□ -1.91
Ssrp1Q08943 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ssrp1Q08943 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ssrp1Q08943 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ssrp1Q08943 Gm23492-201ENSMUST00000116837 115 ntBASIC3.13□□□□□ -1.91
Ssrp1Q08943 Gm6897-201ENSMUST00000117714 138 ntBASIC3.13□□□□□ -1.91
Ssrp1Q08943 Gm14758-201ENSMUST00000119104 138 ntBASIC3.13□□□□□ -1.91
Ssrp1Q08943 Gm26099-201ENSMUST00000157248 109 ntBASIC3.13□□□□□ -1.91
Ssrp1Q08943 Gm25654-201ENSMUST00000158467 88 ntBASIC3.13□□□□□ -1.91
Ssrp1Q08943 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms