Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25980-201ENSMUST00000157176 218 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm22036-201ENSMUST00000157279 215 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm27445-201ENSMUST00000184484 72 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Mir8090-201ENSMUST00000185078 136 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm23370-202ENSMUST00000197008 129 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm44429-201ENSMUST00000203542 186 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.94□□□□□ -1.94
Col8a1Q00780 AC100590.2-201ENSMUST00000219028 215 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm24929-201ENSMUST00000083403 139 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm10242-201ENSMUST00000090064 330 ntBASIC2.94□□□□□ -1.94
Col8a1Q00780 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col8a1Q00780 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col8a1Q00780 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col8a1Q00780 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col8a1Q00780 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col8a1Q00780 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col8a1Q00780 AC153948.1-201ENSMUST00000219080 3838 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col8a1Q00780 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Col8a1Q00780 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm22051-201ENSMUST00000117002 127 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm12025-201ENSMUST00000117768 144 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm12143-201ENSMUST00000119666 332 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm22107-201ENSMUST00000122548 100 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm24716-201ENSMUST00000157524 104 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm23123-201ENSMUST00000157648 144 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm22075-201ENSMUST00000158599 192 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm38298-201ENSMUST00000193578 118 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm24355-201ENSMUST00000082858 122 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm22576-201ENSMUST00000083733 104 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm10212-201ENSMUST00000087884 324 ntBASIC2.93□□□□□ -1.94
Col8a1Q00780 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col8a1Q00780 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col8a1Q00780 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col8a1Q00780 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col8a1Q00780 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col8a1Q00780 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col8a1Q00780 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.92□□□□□ -1.94
Col8a1Q00780 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col8a1Q00780 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col8a1Q00780 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col8a1Q00780 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Gm12443-201ENSMUST00000122308 323 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Gm24681-201ENSMUST00000158760 107 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col8a1Q00780 Gm27783-201ENSMUST00000183534 105 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Snora70-201ENSMUST00000083047 137 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Snord7-201ENSMUST00000083781 97 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
Col8a1Q00780 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.92□□□□□ -1.94
Col8a1Q00780 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col8a1Q00780 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Col8a1Q00780 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Col8a1Q00780 Mir767-201ENSMUST00000103256 107 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Gm14020-201ENSMUST00000118165 662 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Gm12954-201ENSMUST00000118610 611 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Gm9119-201ENSMUST00000118866 495 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Gm12086-201ENSMUST00000120863 228 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Gm44425-201ENSMUST00000203739 429 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.91□□□□□ -1.94
Col8a1Q00780 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
Col8a1Q00780 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.9□□□□□ -1.94
Col8a1Q00780 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Col8a1Q00780 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm2830-201ENSMUST00000140330 385 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm26100-201ENSMUST00000157245 127 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm25393-201ENSMUST00000157336 285 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm23775-201ENSMUST00000158991 249 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm17522-201ENSMUST00000178144 498 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm28825-201ENSMUST00000186233 238 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.9□□□□□ -1.95
Col8a1Q00780 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm25142-201ENSMUST00000082698 107 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm22421-201ENSMUST00000083058 107 ntBASIC2.9□□□□□ -1.95
Col8a1Q00780 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col8a1Q00780 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
Col8a1Q00780 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.89□□□□□ -1.95
Col8a1Q00780 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col8a1Q00780 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col8a1Q00780 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms