Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SgcbP82349 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.2□□□□□ -1.9
SgcbP82349 Gm22003-201ENSMUST00000101885 107 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SgcbP82349 Gm23697-201ENSMUST00000103897 110 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm22270-201ENSMUST00000104034 132 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Snord90-201ENSMUST00000104568 111 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm22678-201ENSMUST00000116974 101 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm24717-201ENSMUST00000157522 124 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm23755-201ENSMUST00000157578 343 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Mir28b-201ENSMUST00000175399 80 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm22756-201ENSMUST00000180118 107 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Mir6408-201ENSMUST00000183643 91 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SgcbP82349 Gm37545-201ENSMUST00000186512 148 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Mir1291-201ENSMUST00000199842 117 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm44425-201ENSMUST00000203739 429 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm44459-201ENSMUST00000203926 160 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm26054-201ENSMUST00000083037 107 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Snora34-201ENSMUST00000083402 138 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Gm24492-201ENSMUST00000083798 107 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SgcbP82349 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SgcbP82349 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.2□□□□□ -1.9
SgcbP82349 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.2□□□□□ -1.9
SgcbP82349 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
SgcbP82349 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SgcbP82349 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
SgcbP82349 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SgcbP82349 Gm13913-201ENSMUST00000121126 260 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm23895-201ENSMUST00000158108 160 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm37037-201ENSMUST00000194475 424 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm44703-201ENSMUST00000205724 248 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.19□□□□□ -1.9
SgcbP82349 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.19□□□□□ -1.9
SgcbP82349 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm22681-201ENSMUST00000083853 106 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm23040-201ENSMUST00000083869 163 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SgcbP82349 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.19□□□□□ -1.9
SgcbP82349 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SgcbP82349 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.19□□□□□ -1.9
SgcbP82349 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SgcbP82349 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SgcbP82349 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SgcbP82349 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SgcbP82349 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SgcbP82349 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SgcbP82349 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SgcbP82349 Gm14536-201ENSMUST00000118324 138 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm15027-201ENSMUST00000120922 138 ntBASIC3.18□□□□□ -1.9
SgcbP82349 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm24896-201ENSMUST00000122741 135 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm22850-201ENSMUST00000157714 82 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm24010-201ENSMUST00000157731 282 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm24213-201ENSMUST00000158255 258 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm23194-201ENSMUST00000158813 105 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm26157-201ENSMUST00000158974 126 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.18□□□□□ -1.9
SgcbP82349 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.18□□□□□ -1.9
SgcbP82349 Mir3969-201ENSMUST00000197106 92 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm45245-201ENSMUST00000210082 376 ntBASIC3.18□□□□□ -1.9
SgcbP82349 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm8508-201ENSMUST00000061226 363 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm23736-201ENSMUST00000082553 75 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Gm22686-201ENSMUST00000082847 100 ntBASIC3.18□□□□□ -1.9
SgcbP82349 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SgcbP82349 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SgcbP82349 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.18□□□□□ -1.9
SgcbP82349 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SgcbP82349 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SgcbP82349 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SgcbP82349 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SgcbP82349 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SgcbP82349 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SgcbP82349 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SgcbP82349 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.17□□□□□ -1.9
SgcbP82349 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SgcbP82349 Gm12723-201ENSMUST00000120700 451 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Gm25980-201ENSMUST00000157176 218 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Snord92-201ENSMUST00000175548 85 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SgcbP82349 Gm27580-201ENSMUST00000183666 149 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Gm28409-201ENSMUST00000187064 103 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Gm37290-201ENSMUST00000195775 339 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Gm43901-201ENSMUST00000203247 453 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Gm44294-201ENSMUST00000205090 728 ntBASIC3.17□□□□□ -1.9
SgcbP82349 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Gm24461-201ENSMUST00000082735 103 ntBASIC3.17□□□□□ -1.9
SgcbP82349 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.17□□□□□ -1.9
SgcbP82349 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SgcbP82349 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 160.2 ms