Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm26077-201ENSMUST00000104064 123 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm14894-201ENSMUST00000117170 270 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm6956-201ENSMUST00000134724 546 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.26□□□□□ -2.05
CiitaP79621 Gm22083-201ENSMUST00000157586 102 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm24192-201ENSMUST00000157978 145 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm26159-201ENSMUST00000158968 104 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm27878-201ENSMUST00000184000 106 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Mir8090-201ENSMUST00000185078 136 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm37313-201ENSMUST00000191673 290 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm37449-201ENSMUST00000193016 270 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm18658-201ENSMUST00000195558 270 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Mir7217-201ENSMUST00000200304 62 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.26□□□□□ -2.05
CiitaP79621 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.26□□□□□ -2.05
CiitaP79621 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.26□□□□□ -2.05
CiitaP79621 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.26□□□□□ -2.05
CiitaP79621 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Gm25788-201ENSMUST00000082721 131 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Mir29c-201ENSMUST00000083614 88 ntBASIC2.26□□□□□ -2.05
CiitaP79621 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CiitaP79621 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CiitaP79621 Gm24907-201ENSMUST00000116932 128 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm25543-201ENSMUST00000122678 312 ntBASIC2.25□□□□□ -2.05
CiitaP79621 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm25115-201ENSMUST00000157187 140 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm26157-201ENSMUST00000158974 126 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm20613-201ENSMUST00000175828 345 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm22264-201ENSMUST00000178200 107 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm27410-201ENSMUST00000183851 115 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm29397-201ENSMUST00000185205 333 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm44482-201ENSMUST00000199232 103 ntBASIC2.25□□□□□ -2.05
CiitaP79621 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.25□□□□□ -2.05
CiitaP79621 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Gm23731-201ENSMUST00000083749 107 ntBASIC2.25□□□□□ -2.05
CiitaP79621 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CiitaP79621 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Gm22713-201ENSMUST00000116895 130 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Gm16328-201ENSMUST00000126985 196 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Gm28995-201ENSMUST00000186625 261 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Gm43578-201ENSMUST00000201250 459 ntBASIC2.24□□□□□ -2.05
CiitaP79621 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
CiitaP79621 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.24□□□□□ -2.05
CiitaP79621 Gm44811-201ENSMUST00000209120 228 ntBASIC2.24□□□□□ -2.05
CiitaP79621 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.24□□□□□ -2.05
CiitaP79621 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.24□□□□□ -2.05
CiitaP79621 Gm24896-201ENSMUST00000122741 135 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm23120-201ENSMUST00000157654 287 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm16038-201ENSMUST00000159317 193 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm25671-201ENSMUST00000178612 105 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm23307-201ENSMUST00000179167 105 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm23793-201ENSMUST00000179396 117 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm25286-201ENSMUST00000179790 105 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm26200-201ENSMUST00000180273 79 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Mir7016-201ENSMUST00000184308 72 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Mir6997-201ENSMUST00000184313 71 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm38041-201ENSMUST00000194445 661 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm44010-201ENSMUST00000204432 331 ntBASIC2.23□□□□□ -2.05
CiitaP79621 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm23404-201ENSMUST00000082543 97 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm25929-201ENSMUST00000082784 107 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CiitaP79621 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.23□□□□□ -2.05
CiitaP79621 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CiitaP79621 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CiitaP79621 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm26500-201ENSMUST00000101867 106 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm12721-201ENSMUST00000120621 268 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm24478-201ENSMUST00000157439 158 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm22836-201ENSMUST00000158441 61 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm23342-201ENSMUST00000158958 115 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm24799-201ENSMUST00000178431 79 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
CiitaP79621 Gm43865-201ENSMUST00000204721 127 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CiitaP79621 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm25079-201ENSMUST00000082529 203 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Snora69-201ENSMUST00000083708 131 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm26175-201ENSMUST00000083794 131 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.22□□□□□ -2.05
CiitaP79621 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.22□□□□□ -2.05
CiitaP79621 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.21□□□□□ -2.06
CiitaP79621 Gm23950-201ENSMUST00000104026 129 ntBASIC2.21□□□□□ -2.06
CiitaP79621 Gm22021-201ENSMUST00000104353 107 ntBASIC2.21□□□□□ -2.06
CiitaP79621 Gm15281-201ENSMUST00000125181 351 ntBASIC2.21□□□□□ -2.06
CiitaP79621 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CiitaP79621 Gm22727-201ENSMUST00000158090 116 ntBASIC2.21□□□□□ -2.06
CiitaP79621 Gm22085-201ENSMUST00000158344 110 ntBASIC2.21□□□□□ -2.06
CiitaP79621 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.21□□□□□ -2.06
CiitaP79621 Gm28058-201ENSMUST00000186421 264 ntBASIC2.21□□□□□ -2.06
CiitaP79621 Gm28288-201ENSMUST00000191019 214 ntBASIC2.21□□□□□ -2.06
CiitaP79621 Gm25820-202ENSMUST00000197479 128 ntBASIC2.21□□□□□ -2.06
CiitaP79621 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.21□□□□□ -2.06
CiitaP79621 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms