Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm13396-201ENSMUST00000120617 271 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm14972-201ENSMUST00000121780 364 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm16328-201ENSMUST00000126985 196 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm6956-201ENSMUST00000134724 546 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm23435-201ENSMUST00000157183 156 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm22221-201ENSMUST00000157362 103 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm23548-201ENSMUST00000158963 106 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm20477-201ENSMUST00000174028 280 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm22510-201ENSMUST00000179304 79 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm26336-201ENSMUST00000179449 79 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm26390-201ENSMUST00000179628 79 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm22263-201ENSMUST00000180060 104 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Mir7047-201ENSMUST00000184595 64 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm27443-201ENSMUST00000184660 98 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm7495-201ENSMUST00000215099 426 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.5□□□□□ -2.17
Ufd1P70362 Gm23041-201ENSMUST00000083868 106 ntBASIC1.5□□□□□ -2.17
Ufd1P70362 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ufd1P70362 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ufd1P70362 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ufd1P70362 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ufd1P70362 Gm25992-201ENSMUST00000102437 109 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm23015-201ENSMUST00000104145 128 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Mir872-201ENSMUST00000104728 81 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm14803-201ENSMUST00000117163 361 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm12417-201ENSMUST00000119153 403 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm13729-201ENSMUST00000120328 406 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.49□□□□□ -2.17
Ufd1P70362 Gm25909-201ENSMUST00000157619 121 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm24853-201ENSMUST00000158026 121 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ufd1P70362 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm36891-201ENSMUST00000191995 655 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm37081-201ENSMUST00000192034 196 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Gm26265-202ENSMUST00000196326 133 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ufd1P70362 Gm26056-201ENSMUST00000083043 104 ntBASIC1.49□□□□□ -2.17
Ufd1P70362 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ufd1P70362 Gm26500-201ENSMUST00000101867 106 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Mir374b-201ENSMUST00000102314 95 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.48□□□□□ -2.17
Ufd1P70362 Gm12956-201ENSMUST00000122184 414 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm11254-201ENSMUST00000122368 653 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.48□□□□□ -2.17
Ufd1P70362 Gm23535-201ENSMUST00000157542 106 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm22113-201ENSMUST00000158343 104 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm23181-201ENSMUST00000158685 110 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm24348-201ENSMUST00000158710 130 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm20462-201ENSMUST00000172623 408 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm24308-201ENSMUST00000177773 114 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Ufd1P70362 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm24805-201ENSMUST00000082931 104 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 Gm23721-201ENSMUST00000083005 107 ntBASIC1.48□□□□□ -2.17
Ufd1P70362 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.47□□□□□ -2.17
Ufd1P70362 Gm24627-201ENSMUST00000122764 138 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Gm22791-201ENSMUST00000157232 145 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.47□□□□□ -2.17
Ufd1P70362 Gm24390-201ENSMUST00000179578 62 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Mir7683-201ENSMUST00000183842 61 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Mir6388-201ENSMUST00000184417 75 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Ufd1P70362 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Ufd1P70362 Gm20257-202ENSMUST00000188643 130 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Gm18291-201ENSMUST00000190791 301 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.47□□□□□ -2.17
Ufd1P70362 Gm43993-201ENSMUST00000203972 247 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Rny3-201ENSMUST00000083011 102 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Gm24615-201ENSMUST00000083268 113 ntBASIC1.47□□□□□ -2.17
Ufd1P70362 Gm14674-201ENSMUST00000117816 342 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm25333-201ENSMUST00000158035 246 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm22075-201ENSMUST00000158599 192 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm16162-201ENSMUST00000162296 297 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm24816-201ENSMUST00000175311 151 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm28257-201ENSMUST00000185244 463 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm28995-201ENSMUST00000186625 261 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm29657-201ENSMUST00000189807 342 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Mir7021-201ENSMUST00000197026 63 ntBASIC1.46□□□□□ -2.18
Ufd1P70362 Gm44010-201ENSMUST00000204432 331 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms