Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Snora7a-201ENSMUST00000082629 140 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 AF357341-201ENSMUST00000083088 75 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.81□□□□□ -1.8
Rfx1P48377 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rfx1P48377 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rfx1P48377 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
Rfx1P48377 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rfx1P48377 Gm23860-201ENSMUST00000179446 132 ntBASIC3.8□□□□□ -1.8
Rfx1P48377 Gm25634-201ENSMUST00000082667 105 ntBASIC3.8□□□□□ -1.8
Rfx1P48377 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.8□□□□□ -1.8
Rfx1P48377 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Rfx1P48377 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.8□□□□□ -1.8
Rfx1P48377 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rfx1P48377 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rfx1P48377 Gm24890-201ENSMUST00000104389 102 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Gm13761-201ENSMUST00000117238 807 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Gm24314-201ENSMUST00000158274 123 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Gm23350-201ENSMUST00000158429 103 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Rfx1P48377 Gm36189-201ENSMUST00000204113 523 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Gm44399-201ENSMUST00000205043 226 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Gm5002-201ENSMUST00000207145 223 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Gm46233-201ENSMUST00000217831 449 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.79□□□□□ -1.8
Rfx1P48377 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rfx1P48377 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rfx1P48377 Gm25727-201ENSMUST00000104522 131 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm12449-201ENSMUST00000117572 234 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm12513-201ENSMUST00000118617 352 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm14491-201ENSMUST00000121919 199 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm24896-201ENSMUST00000122741 135 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Rfx1P48377 Gm22961-201ENSMUST00000157964 106 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm24213-201ENSMUST00000158255 258 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rfx1P48377 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rfx1P48377 Gm5224-201ENSMUST00000183060 350 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.78□□□□□ -1.8
Rfx1P48377 Gm37037-201ENSMUST00000194475 424 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.78□□□□□ -1.8
Rfx1P48377 Gm11351-202ENSMUST00000225724 478 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Gm24977-201ENSMUST00000083106 163 ntBASIC3.78□□□□□ -1.8
Rfx1P48377 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rfx1P48377 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Rfx1P48377 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Rfx1P48377 Snord11-201ENSMUST00000158468 84 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Gm17161-201ENSMUST00000169187 524 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Mir6385-201ENSMUST00000184295 105 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Gm33866-201ENSMUST00000196911 289 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Gm44425-201ENSMUST00000203739 429 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Gm44564-201ENSMUST00000207985 180 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Gm22704-201ENSMUST00000083027 137 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Rfx1P48377 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.77□□□□□ -1.81
Rfx1P48377 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Rfx1P48377 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Rfx1P48377 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Rfx1P48377 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Rfx1P48377 Gm13862-201ENSMUST00000121220 197 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Gm13345-201ENSMUST00000121928 228 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Gm24106-201ENSMUST00000175498 127 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.76□□□□□ -1.81
Rfx1P48377 Mir1291-201ENSMUST00000199842 117 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Mir721-201ENSMUST00000200230 88 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Gm24453-201ENSMUST00000083346 76 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Snora34-201ENSMUST00000083402 138 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.76□□□□□ -1.81
Rfx1P48377 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Rfx1P48377 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Rfx1P48377 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Rfx1P48377 Gm23530-201ENSMUST00000104564 137 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Gm23183-201ENSMUST00000122595 323 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Gm23168-201ENSMUST00000157156 143 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Rfx1P48377 Gm45013-201ENSMUST00000206883 178 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.75□□□□□ -1.81
Rfx1P48377 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.75□□□□□ -1.81
Rfx1P48377 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Gm22972-201ENSMUST00000083297 131 ntBASIC3.75□□□□□ -1.81
Rfx1P48377 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Rfx1P48377 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Rfx1P48377 Gm25977-201ENSMUST00000158697 85 ntBASIC3.74□□□□□ -1.81
Rfx1P48377 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Rfx1P48377 Gm25933-201ENSMUST00000178943 108 ntBASIC3.74□□□□□ -1.81
Rfx1P48377 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.74□□□□□ -1.81
Rfx1P48377 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.74□□□□□ -1.81
Rfx1P48377 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms