Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm23777-201ENSMUST00000158994 259 ntBASIC-0.33□□□□□ -2.46
HttP42859 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC-0.33□□□□□ -2.46
HttP42859 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC-0.33□□□□□ -2.46
HttP42859 Snora81-201ENSMUST00000157310 178 ntBASIC-0.33□□□□□ -2.46
HttP42859 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.33□□□□□ -2.46
HttP42859 Gm3221-201ENSMUST00000164869 440 ntBASIC-0.33□□□□□ -2.46
HttP42859 Gm29661-201ENSMUST00000186781 315 ntBASIC-0.33□□□□□ -2.46
HttP42859 Gm29308-201ENSMUST00000188863 315 ntBASIC-0.33□□□□□ -2.46
HttP42859 Mir3961-201ENSMUST00000198795 59 ntBASIC-0.33□□□□□ -2.46
HttP42859 Gm24038-201ENSMUST00000082872 159 ntBASIC-0.33□□□□□ -2.46
HttP42859 Gm24494-201ENSMUST00000083804 81 ntBASIC-0.34□□□□□ -2.46
HttP42859 Gm24716-201ENSMUST00000157524 104 ntBASIC-0.34□□□□□ -2.46
HttP42859 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
HttP42859 AC132446.1-201ENSMUST00000222655 226 ntBASIC-0.34□□□□□ -2.46
HttP42859 Mir19b-2-201ENSMUST00000083539 84 ntBASIC-0.34□□□□□ -2.46
HttP42859 Gm25560-201ENSMUST00000104606 176 ntBASIC-0.35□□□□□ -2.46
HttP42859 Gm26256-201ENSMUST00000122499 186 ntBASIC-0.35□□□□□ -2.46
HttP42859 CT572985.2-201ENSMUST00000220496 211 ntBASIC-0.35□□□□□ -2.46
HttP42859 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.46
HttP42859 Gm23656-201ENSMUST00000122626 112 ntBASIC-0.35□□□□□ -2.47
HttP42859 Gm18358-201ENSMUST00000173179 1277 ntBASIC-0.35□□□□□ -2.47
HttP42859 Gm43529-201ENSMUST00000199178 412 ntBASIC-0.35□□□□□ -2.47
HttP42859 Gm44128-201ENSMUST00000204909 219 ntBASIC-0.35□□□□□ -2.47
HttP42859 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC-0.35□□□□□ -2.47
HttP42859 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
HttP42859 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.35□□□□□ -2.47
HttP42859 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.35□□□□□ -2.47
HttP42859 Mir129-2-201ENSMUST00000083577 90 ntBASIC-0.35□□□□□ -2.47
HttP42859 Gm11252-201ENSMUST00000120572 939 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm11849-201ENSMUST00000121293 261 ntBASIC-0.36□□□□□ -2.47
HttP42859 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm22338-201ENSMUST00000157715 129 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm23114-201ENSMUST00000158478 117 ntBASIC-0.36□□□□□ -2.47
HttP42859 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm37727-201ENSMUST00000191637 819 ntBASIC-0.36□□□□□ -2.47
HttP42859 Mir703-201ENSMUST00000197105 109 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm23370-201ENSMUST00000199545 130 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm28560-201ENSMUST00000186091 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm28334-201ENSMUST00000186653 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm28495-201ENSMUST00000188452 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm28232-201ENSMUST00000188683 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm28481-201ENSMUST00000189231 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm29059-201ENSMUST00000191534 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm37765-201ENSMUST00000192395 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm37237-201ENSMUST00000192893 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm36968-201ENSMUST00000193737 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm38290-201ENSMUST00000195238 315 ntBASIC-0.36□□□□□ -2.47
HttP42859 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC-0.36□□□□□ -2.47
HttP42859 AC133176.1-201ENSMUST00000226668 219 ntBASIC-0.36□□□□□ -2.47
HttP42859 Gm24149-201ENSMUST00000082757 107 ntBASIC-0.36□□□□□ -2.47
HttP42859 Snora75-201ENSMUST00000082903 133 ntBASIC-0.36□□□□□ -2.47
HttP42859 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
HttP42859 Gm23704-201ENSMUST00000158844 340 ntBASIC-0.37□□□□□ -2.47
HttP42859 Gm37641-201ENSMUST00000193837 239 ntBASIC-0.37□□□□□ -2.47
HttP42859 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.37□□□□□ -2.47
HttP42859 AC126691.1-201ENSMUST00000226534 202 ntBASIC-0.37□□□□□ -2.47
HttP42859 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
HttP42859 Gm22027-201ENSMUST00000122737 127 ntBASIC-0.37□□□□□ -2.47
HttP42859 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.37□□□□□ -2.47
HttP42859 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC-0.37□□□□□ -2.47
HttP42859 Gm27878-201ENSMUST00000184000 106 ntBASIC-0.37□□□□□ -2.47
HttP42859 Gm44607-201ENSMUST00000205611 1090 ntBASIC-0.37□□□□□ -2.47
HttP42859 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC-0.37□□□□□ -2.47
HttP42859 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
HttP42859 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
HttP42859 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC-0.37□□□□□ -2.47
HttP42859 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm14530-201ENSMUST00000122391 333 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm22208-201ENSMUST00000122658 110 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm24388-201ENSMUST00000177872 107 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm18406-201ENSMUST00000185872 669 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm18213-201ENSMUST00000207850 178 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm18774-201ENSMUST00000218269 601 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm37642-201ENSMUST00000193166 1735 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm14566-201ENSMUST00000118915 321 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm15807-201ENSMUST00000119880 1128 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm25706-201ENSMUST00000157828 247 ntBASIC-0.38□□□□□ -2.47
HttP42859 Mir6238-201ENSMUST00000184140 129 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm28825-201ENSMUST00000186233 238 ntBASIC-0.38□□□□□ -2.47
HttP42859 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC-0.38□□□□□ -2.47
HttP42859 AC154692.1-201ENSMUST00000228314 544 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm26263-201ENSMUST00000083281 164 ntBASIC-0.38□□□□□ -2.47
HttP42859 Gm23130-201ENSMUST00000104252 74 ntBASIC-0.39□□□□□ -2.47
HttP42859 Gm25643-201ENSMUST00000158874 103 ntBASIC-0.39□□□□□ -2.47
HttP42859 Mir6372-201ENSMUST00000185114 109 ntBASIC-0.39□□□□□ -2.47
HttP42859 Gm19326-201ENSMUST00000219818 326 ntBASIC-0.39□□□□□ -2.47
HttP42859 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.39□□□□□ -2.47
HttP42859 Gm24573-201ENSMUST00000175499 112 ntBASIC-0.39□□□□□ -2.47
HttP42859 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.39□□□□□ -2.47
HttP42859 Gm28995-201ENSMUST00000186625 261 ntBASIC-0.39□□□□□ -2.47
HttP42859 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC-0.39□□□□□ -2.47
HttP42859 Gm15102-201ENSMUST00000118740 1502 ntBASIC-0.4□□□□□ -2.47
HttP42859 Gm15101-201ENSMUST00000178818 1502 ntBASIC-0.4□□□□□ -2.47
HttP42859 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC-0.4□□□□□ -2.47
HttP42859 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC-0.4□□□□□ -2.47
HttP42859 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC-0.4□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms