Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.17□□□□□ -2.06
Traf1P39428 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.17□□□□□ -2.06
Traf1P39428 Gm22299-201ENSMUST00000082663 136 ntBASIC2.17□□□□□ -2.06
Traf1P39428 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Traf1P39428 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Traf1P39428 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Traf1P39428 Gm23858-201ENSMUST00000158384 106 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Gm26024-201ENSMUST00000158657 322 ntBASIC2.16□□□□□ -2.06
Traf1P39428 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.16□□□□□ -2.06
Traf1P39428 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Gm27979-201ENSMUST00000185126 56 ntBASIC2.16□□□□□ -2.06
Traf1P39428 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Traf1P39428 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.16□□□□□ -2.06
Traf1P39428 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.16□□□□□ -2.06
Traf1P39428 Mir3961-201ENSMUST00000198795 59 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Mir1291-201ENSMUST00000199842 117 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Gm43367-201ENSMUST00000199986 625 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Traf1P39428 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.16□□□□□ -2.06
Traf1P39428 Gm45296-201ENSMUST00000209625 205 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Gm45754-201ENSMUST00000212380 279 ntBASIC2.16□□□□□ -2.06
Traf1P39428 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Traf1P39428 Snora34-201ENSMUST00000083402 138 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Gm26314-201ENSMUST00000083891 107 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.16□□□□□ -2.06
Traf1P39428 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Traf1P39428 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.15□□□□□ -2.06
Traf1P39428 Gm11512-201ENSMUST00000119669 663 ntBASIC2.15□□□□□ -2.07
Traf1P39428 Gm24394-201ENSMUST00000158141 123 ntBASIC2.15□□□□□ -2.07
Traf1P39428 Gm5900-201ENSMUST00000179862 375 ntBASIC2.15□□□□□ -2.07
Traf1P39428 Mir6352-201ENSMUST00000184495 116 ntBASIC2.15□□□□□ -2.07
Traf1P39428 Gm27544-201ENSMUST00000185069 155 ntBASIC2.15□□□□□ -2.07
Traf1P39428 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.15□□□□□ -2.07
Traf1P39428 Gm44408-201ENSMUST00000200205 66 ntBASIC2.15□□□□□ -2.07
Traf1P39428 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.15□□□□□ -2.07
Traf1P39428 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.15□□□□□ -2.07
Traf1P39428 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.15□□□□□ -2.07
Traf1P39428 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Traf1P39428 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Traf1P39428 Gm22435-201ENSMUST00000158552 128 ntBASIC2.14□□□□□ -2.07
Traf1P39428 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.14□□□□□ -2.07
Traf1P39428 Mir3086-201ENSMUST00000175072 87 ntBASIC2.14□□□□□ -2.07
Traf1P39428 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.14□□□□□ -2.07
Traf1P39428 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Traf1P39428 Gm26164-201ENSMUST00000083793 104 ntBASIC2.14□□□□□ -2.07
Traf1P39428 Gm11359-201ENSMUST00000120039 567 ntBASIC2.13□□□□□ -2.07
Traf1P39428 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Traf1P39428 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Traf1P39428 Gm23230-201ENSMUST00000157298 133 ntBASIC2.13□□□□□ -2.07
Traf1P39428 Gm24005-201ENSMUST00000158459 296 ntBASIC2.13□□□□□ -2.07
Traf1P39428 Gm16038-201ENSMUST00000159317 193 ntBASIC2.13□□□□□ -2.07
Traf1P39428 Gm26180-201ENSMUST00000179942 107 ntBASIC2.13□□□□□ -2.07
Traf1P39428 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.13□□□□□ -2.07
Traf1P39428 Gm45119-201ENSMUST00000207612 199 ntBASIC2.13□□□□□ -2.07
Traf1P39428 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.13□□□□□ -2.07
Traf1P39428 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.13□□□□□ -2.07
Traf1P39428 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Traf1P39428 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Traf1P39428 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Gm25543-201ENSMUST00000122678 312 ntBASIC2.12□□□□□ -2.07
Traf1P39428 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.12□□□□□ -2.07
Traf1P39428 Gm17161-201ENSMUST00000169187 524 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Gm21754-201ENSMUST00000177550 479 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.12□□□□□ -2.07
Traf1P39428 Gm28848-201ENSMUST00000189984 168 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Gm43723-201ENSMUST00000196886 189 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.12□□□□□ -2.07
Traf1P39428 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.12□□□□□ -2.07
Traf1P39428 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.12□□□□□ -2.07
Traf1P39428 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Snord68-201ENSMUST00000082516 86 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Gm25813-201ENSMUST00000082748 191 ntBASIC2.12□□□□□ -2.07
Traf1P39428 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Traf1P39428 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Traf1P39428 Gm12351-201ENSMUST00000118727 292 ntBASIC2.11□□□□□ -2.07
Traf1P39428 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.11□□□□□ -2.07
Traf1P39428 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.11□□□□□ -2.07
Traf1P39428 Gm23660-201ENSMUST00000178362 79 ntBASIC2.11□□□□□ -2.07
Traf1P39428 Gm24088-201ENSMUST00000179100 79 ntBASIC2.11□□□□□ -2.07
Traf1P39428 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.11□□□□□ -2.07
Traf1P39428 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Traf1P39428 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.11□□□□□ -2.07
Traf1P39428 Gm45704-201ENSMUST00000212582 403 ntBASIC2.11□□□□□ -2.07
Traf1P39428 Mir429-201ENSMUST00000083493 83 ntBASIC2.11□□□□□ -2.07
Traf1P39428 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Traf1P39428 Gm14296-202ENSMUST00000108931 750 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Gm26249-201ENSMUST00000116708 118 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Gm6829-201ENSMUST00000119858 360 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Traf1P39428 Gm22768-201ENSMUST00000158366 153 ntBASIC2.1□□□□□ -2.07
Traf1P39428 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Gm20438-201ENSMUST00000174441 329 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Mir7679-201ENSMUST00000183379 63 ntBASIC2.1□□□□□ -2.07
Traf1P39428 Mir7009-201ENSMUST00000184519 64 ntBASIC2.1□□□□□ -2.07
Traf1P39428 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.1□□□□□ -2.07
Traf1P39428 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms