Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Pde6bP23440 Gm10298-201ENSMUST00000074801 265 ntBASIC3.72□□□□□ -1.81
Pde6bP23440 Gm24453-201ENSMUST00000083346 76 ntBASIC3.72□□□□□ -1.81
Pde6bP23440 Mir208a-201ENSMUST00000083498 83 ntBASIC3.72□□□□□ -1.81
Pde6bP23440 Mir488-201ENSMUST00000093595 109 ntBASIC3.72□□□□□ -1.81
Pde6bP23440 Gm26327-201ENSMUST00000093724 111 ntBASIC3.72□□□□□ -1.81
Pde6bP23440 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Pde6bP23440 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Pde6bP23440 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Pde6bP23440 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Pde6bP23440 Gm15183-201ENSMUST00000118933 348 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm23791-201ENSMUST00000122553 293 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm24892-201ENSMUST00000122747 104 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm25267-201ENSMUST00000158522 63 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm17117-201ENSMUST00000163665 299 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm27374-201ENSMUST00000183660 81 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm45492-201ENSMUST00000211611 288 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm22299-201ENSMUST00000082663 136 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm25142-201ENSMUST00000082698 107 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Snord35b-201ENSMUST00000082833 87 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Gm10172-201ENSMUST00000085929 558 ntBASIC3.71□□□□□ -1.82
Pde6bP23440 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Pde6bP23440 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pde6bP23440 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pde6bP23440 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Pde6bP23440 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pde6bP23440 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Pde6bP23440 Gm24283-201ENSMUST00000104233 107 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 Gm11460-201ENSMUST00000118200 361 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 Gm23257-201ENSMUST00000158322 132 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 Mir6993-201ENSMUST00000184912 65 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 Gm18000-201ENSMUST00000212153 800 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 Gm23947-201ENSMUST00000093636 107 ntBASIC3.7□□□□□ -1.82
Pde6bP23440 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Pde6bP23440 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Pde6bP23440 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Pde6bP23440 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Pde6bP23440 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm24440-201ENSMUST00000157236 63 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm26100-201ENSMUST00000157245 127 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm23589-201ENSMUST00000157660 105 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm23592-201ENSMUST00000157859 117 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm24213-201ENSMUST00000158255 258 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm24512-201ENSMUST00000174963 65 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm23053-201ENSMUST00000175136 96 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm22910-201ENSMUST00000178568 132 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Mir6370-201ENSMUST00000183510 120 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Gm44052-201ENSMUST00000203382 396 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.69□□□□□ -1.82
Pde6bP23440 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Pde6bP23440 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Pde6bP23440 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pde6bP23440 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pde6bP23440 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Pde6bP23440 Gm13443-201ENSMUST00000120770 555 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Gm26049-201ENSMUST00000157313 108 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Gm26265-202ENSMUST00000196326 133 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Gm9251-201ENSMUST00000197202 628 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Gm43932-201ENSMUST00000204499 52 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.68□□□□□ -1.82
Pde6bP23440 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Gm25789-201ENSMUST00000083294 76 ntBASIC3.68□□□□□ -1.82
Pde6bP23440 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Pde6bP23440 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pde6bP23440 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Pde6bP23440 Gm13167-201ENSMUST00000118554 578 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.67□□□□□ -1.82
Pde6bP23440 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pde6bP23440 Gm24717-201ENSMUST00000157522 124 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Gm24010-201ENSMUST00000157731 282 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Snord92-201ENSMUST00000175548 85 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Mir6399-201ENSMUST00000184050 84 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Gm29553-201ENSMUST00000189692 279 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Snora70-201ENSMUST00000083047 137 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Gm22421-201ENSMUST00000083058 107 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Gm23727-201ENSMUST00000083352 164 ntBASIC3.67□□□□□ -1.82
Pde6bP23440 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pde6bP23440 Gm11598-201ENSMUST00000119257 357 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Gm24916-201ENSMUST00000157287 79 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Gm25490-201ENSMUST00000158734 130 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Gm16289-201ENSMUST00000162079 183 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pde6bP23440 Gm39147-201ENSMUST00000211376 465 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Gm22248-201ENSMUST00000082482 150 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Gm23264-201ENSMUST00000083372 107 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Snora2b-201ENSMUST00000084005 137 ntBASIC3.66□□□□□ -1.82
Pde6bP23440 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pde6bP23440 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pde6bP23440 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.65□□□□□ -1.82
Pde6bP23440 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pde6bP23440 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
Pde6bP23440 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pde6bP23440 Snord14c-201ENSMUST00000101927 86 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms