Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.47□□□□□ -2.17
P20040 Gm45402-201ENSMUST00000211796 223 ntBASIC1.47□□□□□ -2.17
P20040 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
P20040 Mir873a-201ENSMUST00000104863 77 ntBASIC1.46□□□□□ -2.18
P20040 Mir3096-201ENSMUST00000116685 71 ntBASIC1.46□□□□□ -2.18
P20040 Gm26249-201ENSMUST00000116708 118 ntBASIC1.46□□□□□ -2.18
P20040 Gm11386-201ENSMUST00000117761 347 ntBASIC1.46□□□□□ -2.18
P20040 Gm14269-201ENSMUST00000120455 306 ntBASIC1.46□□□□□ -2.18
P20040 Gm25279-201ENSMUST00000122608 133 ntBASIC1.46□□□□□ -2.18
P20040 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.46□□□□□ -2.18
P20040 Gm15899-201ENSMUST00000128586 238 ntBASIC1.46□□□□□ -2.18
P20040 Gm22136-201ENSMUST00000158751 268 ntBASIC1.46□□□□□ -2.18
P20040 Gm16038-201ENSMUST00000159317 193 ntBASIC1.46□□□□□ -2.18
P20040 Mir7683-201ENSMUST00000183842 61 ntBASIC1.46□□□□□ -2.18
P20040 Gm27248-201ENSMUST00000184004 166 ntBASIC1.46□□□□□ -2.18
P20040 Mir7225-201ENSMUST00000184178 54 ntBASIC1.46□□□□□ -2.18
P20040 Mir3569-201ENSMUST00000185080 58 ntBASIC1.46□□□□□ -2.18
P20040 Gm38041-201ENSMUST00000194445 661 ntBASIC1.46□□□□□ -2.18
P20040 Gm9227-201ENSMUST00000194733 566 ntBASIC1.46□□□□□ -2.18
P20040 Gm44726-201ENSMUST00000203427 217 ntBASIC1.46□□□□□ -2.18
P20040 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.46□□□□□ -2.18
P20040 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.46□□□□□ -2.18
P20040 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.46□□□□□ -2.18
P20040 Gm46312-201ENSMUST00000220961 420 ntBASIC1.46□□□□□ -2.18
P20040 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.46□□□□□ -2.18
P20040 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.46□□□□□ -2.18
P20040 Gm22972-201ENSMUST00000083297 131 ntBASIC1.46□□□□□ -2.18
P20040 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.45□□□□□ -2.18
P20040 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
P20040 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
P20040 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
P20040 Gm26474-201ENSMUST00000116762 122 ntBASIC1.45□□□□□ -2.18
P20040 Snord98-201ENSMUST00000116819 65 ntBASIC1.45□□□□□ -2.18
P20040 Gm22193-201ENSMUST00000116868 76 ntBASIC1.45□□□□□ -2.18
P20040 Gm25543-201ENSMUST00000122678 312 ntBASIC1.45□□□□□ -2.18
P20040 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.45□□□□□ -2.18
P20040 Gm22221-201ENSMUST00000157362 103 ntBASIC1.45□□□□□ -2.18
P20040 Gm25333-201ENSMUST00000158035 246 ntBASIC1.45□□□□□ -2.18
P20040 Gm22075-201ENSMUST00000158599 192 ntBASIC1.45□□□□□ -2.18
P20040 Gm22665-201ENSMUST00000158720 275 ntBASIC1.45□□□□□ -2.18
P20040 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm25730-201ENSMUST00000178753 165 ntBASIC1.45□□□□□ -2.18
P20040 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm36891-201ENSMUST00000191995 655 ntBASIC1.45□□□□□ -2.18
P20040 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Gm44384-201ENSMUST00000200208 114 ntBASIC1.45□□□□□ -2.18
P20040 Gm45403-201ENSMUST00000209453 276 ntBASIC1.45□□□□□ -2.18
P20040 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.45□□□□□ -2.18
P20040 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
P20040 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.44□□□□□ -2.18
P20040 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.44□□□□□ -2.18
P20040 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.44□□□□□ -2.18
P20040 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
P20040 Gm12351-201ENSMUST00000118727 292 ntBASIC1.44□□□□□ -2.18
P20040 Gm14972-201ENSMUST00000121780 364 ntBASIC1.44□□□□□ -2.18
P20040 Gm24085-201ENSMUST00000175172 116 ntBASIC1.44□□□□□ -2.18
P20040 Gm25035-201ENSMUST00000175414 77 ntBASIC1.44□□□□□ -2.18
P20040 Gm22510-201ENSMUST00000179304 79 ntBASIC1.44□□□□□ -2.18
P20040 Gm26336-201ENSMUST00000179449 79 ntBASIC1.44□□□□□ -2.18
P20040 Gm26390-201ENSMUST00000179628 79 ntBASIC1.44□□□□□ -2.18
P20040 Mir6388-201ENSMUST00000184417 75 ntBASIC1.44□□□□□ -2.18
P20040 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.44□□□□□ -2.18
P20040 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.44□□□□□ -2.18
P20040 Gm43427-201ENSMUST00000198188 331 ntBASIC1.44□□□□□ -2.18
P20040 Gm44408-201ENSMUST00000200205 66 ntBASIC1.44□□□□□ -2.18
P20040 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.44□□□□□ -2.18
P20040 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
P20040 Gm45754-201ENSMUST00000212380 279 ntBASIC1.44□□□□□ -2.18
P20040 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.44□□□□□ -2.18
P20040 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.44□□□□□ -2.18
P20040 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
P20040 Gm24406-201ENSMUST00000083026 128 ntBASIC1.44□□□□□ -2.18
P20040 Gm23100-201ENSMUST00000083455 141 ntBASIC1.44□□□□□ -2.18
P20040 Mir340-201ENSMUST00000083483 98 ntBASIC1.44□□□□□ -2.18
P20040 Gm26314-201ENSMUST00000083891 107 ntBASIC1.44□□□□□ -2.18
P20040 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.44□□□□□ -2.18
P20040 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
P20040 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.43□□□□□ -2.18
P20040 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
P20040 Gm22656-201ENSMUST00000104199 171 ntBASIC1.43□□□□□ -2.18
P20040 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.43□□□□□ -2.18
P20040 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
P20040 Gm23230-201ENSMUST00000157298 133 ntBASIC1.43□□□□□ -2.18
P20040 Gm25486-201ENSMUST00000158726 63 ntBASIC1.43□□□□□ -2.18
P20040 Cfap61-214ENSMUST00000167179 183 ntBASIC1.43□□□□□ -2.18
P20040 Gm22263-201ENSMUST00000180060 104 ntBASIC1.43□□□□□ -2.18
P20040 Gm27265-201ENSMUST00000183559 77 ntBASIC1.43□□□□□ -2.18
P20040 Gm28848-201ENSMUST00000189984 168 ntBASIC1.43□□□□□ -2.18
P20040 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.43□□□□□ -2.18
P20040 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
P20040 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.43□□□□□ -2.18
P20040 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
P20040 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms