Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Msx1P13297 Gm44489-201ENSMUST00000104619 97 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Gm25828-201ENSMUST00000157087 95 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Gm25910-201ENSMUST00000157620 140 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Gm23585-201ENSMUST00000157656 102 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Gm25012-201ENSMUST00000158396 164 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Gm37104-201ENSMUST00000193278 196 ntBASIC3.82□□□□□ -1.8
Msx1P13297 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.82□□□□□ -1.8
Msx1P13297 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Mir34b-201ENSMUST00000083558 84 ntBASIC3.82□□□□□ -1.8
Msx1P13297 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
Msx1P13297 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Msx1P13297 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.82□□□□□ -1.8
Msx1P13297 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Msx1P13297 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Msx1P13297 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Msx1P13297 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Msx1P13297 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Msx1P13297 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Msx1P13297 Gm24067-201ENSMUST00000104514 85 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm8666-201ENSMUST00000117517 292 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm7123-201ENSMUST00000117647 213 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm14568-201ENSMUST00000119321 294 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm14282-201ENSMUST00000119484 240 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm14687-201ENSMUST00000120206 363 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm11281-201ENSMUST00000141391 576 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm24480-201ENSMUST00000157442 103 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm23391-201ENSMUST00000157579 104 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm24898-201ENSMUST00000158133 106 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm22521-201ENSMUST00000158272 134 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Msx1P13297 Gm27672-201ENSMUST00000183751 204 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm6060-201ENSMUST00000188671 251 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm45006-201ENSMUST00000206078 690 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm19366-201ENSMUST00000206996 156 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Msx1P13297 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Msx1P13297 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.81□□□□□ -1.8
Msx1P13297 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.81□□□□□ -1.8
Msx1P13297 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Msx1P13297 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Msx1P13297 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Msx1P13297 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Msx1P13297 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Msx1P13297 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Msx1P13297 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Msx1P13297 Gm22031-201ENSMUST00000116945 126 ntBASIC3.8□□□□□ -1.8
Msx1P13297 Mir6385-201ENSMUST00000184295 105 ntBASIC3.8□□□□□ -1.8
Msx1P13297 Gm19620-201ENSMUST00000195972 434 ntBASIC3.8□□□□□ -1.8
Msx1P13297 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.8□□□□□ -1.8
Msx1P13297 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.8□□□□□ -1.8
Msx1P13297 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.8□□□□□ -1.8
Msx1P13297 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Msx1P13297 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.8□□□□□ -1.8
Msx1P13297 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Msx1P13297 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Msx1P13297 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Msx1P13297 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Msx1P13297 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Msx1P13297 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
Msx1P13297 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Msx1P13297 Gm23322-201ENSMUST00000104464 167 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Mir3083-201ENSMUST00000175377 64 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm22120-201ENSMUST00000175590 70 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm23933-201ENSMUST00000178405 79 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm26466-201ENSMUST00000179615 79 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm37330-201ENSMUST00000192606 153 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.79□□□□□ -1.8
Msx1P13297 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Msx1P13297 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm43217-201ENSMUST00000199513 367 ntBASIC3.79□□□□□ -1.8
Msx1P13297 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.79□□□□□ -1.8
Msx1P13297 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm22507-201ENSMUST00000082773 160 ntBASIC3.79□□□□□ -1.8
Msx1P13297 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Msx1P13297 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Msx1P13297 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Msx1P13297 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Msx1P13297 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Msx1P13297 Gm25168-201ENSMUST00000104189 132 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm23175-201ENSMUST00000104371 132 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm13852-201ENSMUST00000122350 242 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm26187-201ENSMUST00000157693 101 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm29535-201ENSMUST00000185723 109 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm6801-201ENSMUST00000190697 339 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm28143-201ENSMUST00000191082 109 ntBASIC3.78□□□□□ -1.8
Msx1P13297 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm23443-201ENSMUST00000082916 128 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Gm23850-201ENSMUST00000083830 169 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Msx1P13297 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.78□□□□□ -1.8
Msx1P13297 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Msx1P13297 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Msx1P13297 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Msx1P13297 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Msx1P13297 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms