Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm26379-202ENSMUST00000200225 132 ntBASIC3.64□□□□□ -1.83
RaraP11416 Gm44355-201ENSMUST00000200417 104 ntBASIC3.64□□□□□ -1.83
RaraP11416 Gm22245-201ENSMUST00000082479 103 ntBASIC3.64□□□□□ -1.83
RaraP11416 Gm24625-201ENSMUST00000082622 130 ntBASIC3.64□□□□□ -1.83
RaraP11416 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.64□□□□□ -1.83
RaraP11416 Mir132-201ENSMUST00000083603 66 ntBASIC3.64□□□□□ -1.83
RaraP11416 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RaraP11416 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.64□□□□□ -1.83
RaraP11416 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RaraP11416 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RaraP11416 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RaraP11416 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm24096-201ENSMUST00000103905 110 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm24234-201ENSMUST00000104316 107 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm6025-201ENSMUST00000121517 201 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm25105-201ENSMUST00000122477 130 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm22477-201ENSMUST00000122569 316 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.63□□□□□ -1.83
RaraP11416 Gm22281-201ENSMUST00000157198 103 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm25625-201ENSMUST00000157221 96 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm22586-201ENSMUST00000157507 122 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm24717-201ENSMUST00000157522 124 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm26405-201ENSMUST00000158495 100 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm25464-201ENSMUST00000175481 107 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm27648-201ENSMUST00000184315 107 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm29452-201ENSMUST00000187996 313 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.63□□□□□ -1.83
RaraP11416 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.63□□□□□ -1.83
RaraP11416 Mir7118-201ENSMUST00000197760 61 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm22681-201ENSMUST00000083853 106 ntBASIC3.63□□□□□ -1.83
RaraP11416 Gm25630-201ENSMUST00000084000 162 ntBASIC3.63□□□□□ -1.83
RaraP11416 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RaraP11416 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.63□□□□□ -1.83
RaraP11416 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RaraP11416 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RaraP11416 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RaraP11416 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RaraP11416 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.62□□□□□ -1.83
RaraP11416 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RaraP11416 Gm23234-201ENSMUST00000157304 134 ntBASIC3.62□□□□□ -1.83
RaraP11416 Gm24010-201ENSMUST00000157731 282 ntBASIC3.62□□□□□ -1.83
RaraP11416 Mir1951-201ENSMUST00000157981 89 ntBASIC3.62□□□□□ -1.83
RaraP11416 Gm25020-201ENSMUST00000178071 107 ntBASIC3.62□□□□□ -1.83
RaraP11416 Gm22910-201ENSMUST00000178568 132 ntBASIC3.62□□□□□ -1.83
RaraP11416 Gm22507-201ENSMUST00000082773 160 ntBASIC3.62□□□□□ -1.83
RaraP11416 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RaraP11416 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RaraP11416 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.62□□□□□ -1.83
RaraP11416 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm22497-201ENSMUST00000104499 131 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm11598-201ENSMUST00000119257 357 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm26020-201ENSMUST00000122729 183 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm24908-201ENSMUST00000157294 127 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm22483-201ENSMUST00000157986 274 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RaraP11416 Gm26141-201ENSMUST00000175299 126 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm25198-201ENSMUST00000178574 110 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm27580-201ENSMUST00000183666 149 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm43676-201ENSMUST00000197532 540 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm44703-201ENSMUST00000205724 248 ntBASIC3.61□□□□□ -1.83
RaraP11416 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.61□□□□□ -1.83
RaraP11416 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.61□□□□□ -1.83
RaraP11416 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.61□□□□□ -1.83
RaraP11416 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.61□□□□□ -1.83
RaraP11416 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.61□□□□□ -1.83
RaraP11416 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
RaraP11416 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RaraP11416 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
RaraP11416 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RaraP11416 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.61□□□□□ -1.83
RaraP11416 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RaraP11416 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.6□□□□□ -1.83
RaraP11416 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RaraP11416 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RaraP11416 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RaraP11416 Gm23256-201ENSMUST00000102235 110 ntBASIC3.6□□□□□ -1.83
RaraP11416 Gm12458-201ENSMUST00000119387 495 ntBASIC3.6□□□□□ -1.83
RaraP11416 Gm14491-201ENSMUST00000121919 199 ntBASIC3.6□□□□□ -1.83
RaraP11416 Gm23655-201ENSMUST00000122627 105 ntBASIC3.6□□□□□ -1.83
RaraP11416 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.6□□□□□ -1.83
RaraP11416 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.6□□□□□ -1.83
RaraP11416 Mir5136-201ENSMUST00000175573 76 ntBASIC3.6□□□□□ -1.83
RaraP11416 Gm22908-201ENSMUST00000177620 110 ntBASIC3.6□□□□□ -1.83
RaraP11416 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.6□□□□□ -1.83
RaraP11416 Gm18433-202ENSMUST00000195682 196 ntBASIC3.6□□□□□ -1.83
RaraP11416 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.6□□□□□ -1.83
RaraP11416 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RaraP11416 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RaraP11416 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RaraP11416 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RaraP11416 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RaraP11416 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RaraP11416 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm25089-201ENSMUST00000102015 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Snord90-201ENSMUST00000104568 111 ntBASIC3.59□□□□□ -1.83
RaraP11416 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23183-201ENSMUST00000122595 323 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm24916-201ENSMUST00000157287 79 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23540-201ENSMUST00000157543 164 ntBASIC3.59□□□□□ -1.83
RaraP11416 Gm23755-201ENSMUST00000157578 343 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms