Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm17100-201ENSMUST00000168963 272 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm17161-201ENSMUST00000169187 524 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm22862-201ENSMUST00000178593 121 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm27265-201ENSMUST00000183559 77 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.74□□□□□ -2.13
Lire1P11260 Gm43431-201ENSMUST00000198577 340 ntBASIC1.74□□□□□ -2.13
Lire1P11260 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.74□□□□□ -2.13
Lire1P11260 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.74□□□□□ -2.13
Lire1P11260 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.74□□□□□ -2.13
Lire1P11260 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.74□□□□□ -2.13
Lire1P11260 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Lire1P11260 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.73□□□□□ -2.13
Lire1P11260 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm13457-201ENSMUST00000117885 267 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm23390-201ENSMUST00000157393 106 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Lire1P11260 Gm29397-201ENSMUST00000185205 333 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm29613-201ENSMUST00000185846 313 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm29603-201ENSMUST00000186792 334 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm29544-201ENSMUST00000188860 313 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm28808-201ENSMUST00000190978 313 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm38280-201ENSMUST00000192610 158 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Mir3087-201ENSMUST00000199405 56 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.73□□□□□ -2.13
Lire1P11260 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.73□□□□□ -2.13
Lire1P11260 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Lire1P11260 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.73□□□□□ -2.13
Lire1P11260 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Mir410-201ENSMUST00000083563 81 ntBASIC1.73□□□□□ -2.13
Lire1P11260 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Lire1P11260 Gm11359-201ENSMUST00000120039 567 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Gm13153-201ENSMUST00000120969 637 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Gm11389-201ENSMUST00000121407 430 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
Lire1P11260 Gm24191-201ENSMUST00000157977 122 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Gm26405-201ENSMUST00000158495 100 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Gm25163-201ENSMUST00000158905 104 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Gm27544-201ENSMUST00000185069 155 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Gm37778-201ENSMUST00000191732 190 ntBASIC1.72□□□□□ -2.13
Lire1P11260 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.72□□□□□ -2.13
Lire1P11260 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.72□□□□□ -2.13
Lire1P11260 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Lire1P11260 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Lire1P11260 Gm12351-201ENSMUST00000118727 292 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm22537-201ENSMUST00000158172 199 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm25051-201ENSMUST00000158602 249 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm24638-201ENSMUST00000179807 132 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm11392-201ENSMUST00000181419 710 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm27711-201ENSMUST00000183802 118 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Mir6352-201ENSMUST00000184495 116 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Mir7678-201ENSMUST00000185076 71 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Trbv22-201ENSMUST00000191697 291 ntBASIC1.71□□□□□ -2.14
Lire1P11260 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm5034-201ENSMUST00000199115 634 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm42857-201ENSMUST00000200823 339 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm45456-201ENSMUST00000210841 243 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Lire1P11260 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Lire1P11260 Gm26457-201ENSMUST00000082678 78 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
Lire1P11260 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.71□□□□□ -2.14
Lire1P11260 Gm25759-201ENSMUST00000103988 129 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm13432-201ENSMUST00000118861 241 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm23212-201ENSMUST00000122718 60 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Snord13-201ENSMUST00000157627 104 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm24656-201ENSMUST00000177548 132 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm24390-201ENSMUST00000179578 62 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm24536-201ENSMUST00000083144 107 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm24615-201ENSMUST00000083268 113 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm26108-201ENSMUST00000083973 191 ntBASIC1.7□□□□□ -2.14
Lire1P11260 Gm22834-201ENSMUST00000102021 79 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Gm25495-201ENSMUST00000104431 131 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Gm14937-201ENSMUST00000119709 208 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Gm24915-201ENSMUST00000157288 78 ntBASIC1.69□□□□□ -2.14
Lire1P11260 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
Lire1P11260 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.69□□□□□ -2.14
Lire1P11260 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Gm37162-201ENSMUST00000191708 551 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Gm44483-201ENSMUST00000197203 97 ntBASIC1.69□□□□□ -2.14
Lire1P11260 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.69□□□□□ -2.14
Lire1P11260 Gm18696-201ENSMUST00000220103 274 ntBASIC1.69□□□□□ -2.14
Lire1P11260 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.69□□□□□ -2.14
Lire1P11260 Mir701-201ENSMUST00000102208 109 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Lire1P11260 Gm22771-201ENSMUST00000104449 91 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Gm25507-201ENSMUST00000116981 144 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Gm6829-201ENSMUST00000119858 360 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Gm23411-201ENSMUST00000157988 62 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Gm16038-201ENSMUST00000159317 193 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Gm9830-201ENSMUST00000178509 357 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Gm29640-201ENSMUST00000187972 278 ntBASIC1.68□□□□□ -2.14
Lire1P11260 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms