Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm29073-201ENSMUST00000185563 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm29495-201ENSMUST00000189319 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm28090-201ENSMUST00000189458 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21647-201ENSMUST00000189755 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm29165-201ENSMUST00000190655 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm29211-201ENSMUST00000191470 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Mir1291-201ENSMUST00000199842 117 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm45907-201ENSMUST00000213023 193 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Snora34-201ENSMUST00000083402 138 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm6956-201ENSMUST00000134724 546 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm24191-201ENSMUST00000157977 122 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm24901-201ENSMUST00000158125 110 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm26501-201ENSMUST00000178307 107 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm21064-202ENSMUST00000190583 278 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm37658-201ENSMUST00000192672 315 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.46□□□□□ -2.18
Chmp6P0C0A3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm24623-201ENSMUST00000082616 194 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm22972-201ENSMUST00000083297 131 ntBASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Chmp6P0C0A3 Gm26249-201ENSMUST00000116708 118 ntBASIC1.45□□□□□ -2.18
Chmp6P0C0A3 Gm24677-201ENSMUST00000158755 150 ntBASIC1.45□□□□□ -2.18
Chmp6P0C0A3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.45□□□□□ -2.18
Chmp6P0C0A3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Chmp6P0C0A3 Gm27517-201ENSMUST00000184347 236 ntBASIC1.45□□□□□ -2.18
Chmp6P0C0A3 Gm44337-201ENSMUST00000196553 114 ntBASIC1.45□□□□□ -2.18
Chmp6P0C0A3 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.45□□□□□ -2.18
Chmp6P0C0A3 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.45□□□□□ -2.18
Chmp6P0C0A3 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.45□□□□□ -2.18
Chmp6P0C0A3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm22193-201ENSMUST00000116868 76 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm25507-201ENSMUST00000116981 144 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm11606-201ENSMUST00000120706 617 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm14766-201ENSMUST00000121689 367 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm23854-201ENSMUST00000158378 108 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm23267-201ENSMUST00000178490 132 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Mir6419-201ENSMUST00000184784 113 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm43723-201ENSMUST00000196886 189 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm44429-201ENSMUST00000203542 186 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm25896-201ENSMUST00000083713 136 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm25651-201ENSMUST00000083782 119 ntBASIC1.44□□□□□ -2.18
Chmp6P0C0A3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Chmp6P0C0A3 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm11359-201ENSMUST00000120039 567 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm22221-201ENSMUST00000157362 103 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm25054-201ENSMUST00000157370 97 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm22308-201ENSMUST00000177609 107 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm29397-201ENSMUST00000185205 333 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm34073-201ENSMUST00000195736 212 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Snora3-201ENSMUST00000083082 132 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.43□□□□□ -2.18
Chmp6P0C0A3 Gm23015-201ENSMUST00000104145 128 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Gm14355-201ENSMUST00000117352 264 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Gm14364-201ENSMUST00000129209 267 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Gm26150-201ENSMUST00000157426 151 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Snord13-201ENSMUST00000157627 104 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Gm23411-201ENSMUST00000157988 62 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Gm16038-201ENSMUST00000159317 193 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 Gm45116-201ENSMUST00000207392 275 ntBASIC1.42□□□□□ -2.18
Chmp6P0C0A3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm12309-201ENSMUST00000119889 182 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm11389-201ENSMUST00000121407 430 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm26405-201ENSMUST00000158495 100 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm22263-201ENSMUST00000180060 104 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm29005-201ENSMUST00000186773 320 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm45315-201ENSMUST00000209283 333 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Chmp6P0C0A3 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm22834-201ENSMUST00000102021 79 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Mir374b-201ENSMUST00000102314 95 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Mir653-201ENSMUST00000102402 85 ntBASIC1.4□□□□□ -2.19
Chmp6P0C0A3 Gm22771-201ENSMUST00000104449 91 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms