Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hoxd3P09027 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Hoxd3P09027 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Hoxd3P09027 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Hoxd3P09027 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.15□□□□□ -1.9
Hoxd3P09027 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Hoxd3P09027 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm25272-201ENSMUST00000104293 128 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm13588-201ENSMUST00000120026 135 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm23324-201ENSMUST00000157421 131 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm22521-201ENSMUST00000158272 134 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm22527-201ENSMUST00000158816 106 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Mir5710-201ENSMUST00000176884 69 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm23567-201ENSMUST00000178005 107 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm8034-201ENSMUST00000178853 132 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm26435-201ENSMUST00000179026 107 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Mir6350-201ENSMUST00000183639 105 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm38311-201ENSMUST00000192945 165 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm43217-201ENSMUST00000199513 367 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm44084-201ENSMUST00000203947 409 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm44921-201ENSMUST00000205290 301 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm19366-201ENSMUST00000206996 156 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Hoxd3P09027 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hoxd3P09027 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Hoxd3P09027 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.15□□□□□ -1.91
Hoxd3P09027 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hoxd3P09027 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hoxd3P09027 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm25091-201ENSMUST00000103997 71 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm7123-201ENSMUST00000117647 213 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm12458-201ENSMUST00000119387 495 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm7618-201ENSMUST00000121643 171 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm13852-201ENSMUST00000122350 242 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm22228-201ENSMUST00000157364 101 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm23859-201ENSMUST00000158383 64 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.14□□□□□ -1.91
Hoxd3P09027 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm28267-201ENSMUST00000191093 265 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm37330-201ENSMUST00000192606 153 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm43899-201ENSMUST00000203675 246 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Gm25588-201ENSMUST00000082501 140 ntBASIC3.14□□□□□ -1.91
Hoxd3P09027 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hoxd3P09027 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hoxd3P09027 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hoxd3P09027 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hoxd3P09027 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hoxd3P09027 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm22935-201ENSMUST00000103960 104 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm25169-201ENSMUST00000104190 129 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm14586-201ENSMUST00000119571 408 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Mir1251-201ENSMUST00000175486 84 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm20613-201ENSMUST00000175828 345 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm19774-201ENSMUST00000190667 114 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Mir129b-201ENSMUST00000197461 65 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm43730-201ENSMUST00000199863 372 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm44964-201ENSMUST00000207011 273 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm22454-201ENSMUST00000082583 107 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm26175-201ENSMUST00000083794 131 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.13□□□□□ -1.91
Hoxd3P09027 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Hoxd3P09027 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hoxd3P09027 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Hoxd3P09027 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
Hoxd3P09027 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Hoxd3P09027 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
Hoxd3P09027 Mir547-201ENSMUST00000102051 78 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Gm14299-201ENSMUST00000117586 397 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Gm24896-201ENSMUST00000122741 135 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Gm22398-201ENSMUST00000174941 125 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Gm25731-201ENSMUST00000175167 125 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Gm19908-201ENSMUST00000204684 391 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hoxd3P09027 Gm44824-201ENSMUST00000207021 229 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Mir340-201ENSMUST00000083483 98 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.12□□□□□ -1.91
Hoxd3P09027 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hoxd3P09027 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms