Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm26922-201ENSMUST00000082687 72 ntBASIC2.25□□□□□ -2.05
NefmP08553 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NefmP08553 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.25□□□□□ -2.05
NefmP08553 Mir374b-201ENSMUST00000102314 95 ntBASIC2.24□□□□□ -2.05
NefmP08553 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NefmP08553 Gm13439-201ENSMUST00000117541 409 ntBASIC2.24□□□□□ -2.05
NefmP08553 Gm11386-201ENSMUST00000117761 347 ntBASIC2.24□□□□□ -2.05
NefmP08553 Gm22075-201ENSMUST00000158599 192 ntBASIC2.24□□□□□ -2.05
NefmP08553 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NefmP08553 Gm20477-201ENSMUST00000174028 280 ntBASIC2.24□□□□□ -2.05
NefmP08553 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.24□□□□□ -2.05
NefmP08553 Gm9830-201ENSMUST00000178509 357 ntBASIC2.24□□□□□ -2.05
NefmP08553 Gm26652-202ENSMUST00000181672 475 ntBASIC2.24□□□□□ -2.05
NefmP08553 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.24□□□□□ -2.05
NefmP08553 Gm37579-201ENSMUST00000194291 142 ntBASIC2.24□□□□□ -2.05
NefmP08553 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.24□□□□□ -2.05
NefmP08553 Gm26457-201ENSMUST00000082678 78 ntBASIC2.24□□□□□ -2.05
NefmP08553 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NefmP08553 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NefmP08553 Gm22199-201ENSMUST00000122660 126 ntBASIC2.23□□□□□ -2.05
NefmP08553 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.23□□□□□ -2.05
NefmP08553 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NefmP08553 Gm23120-201ENSMUST00000157654 287 ntBASIC2.23□□□□□ -2.05
NefmP08553 Gm23022-201ENSMUST00000158768 180 ntBASIC2.23□□□□□ -2.05
NefmP08553 Gm17148-201ENSMUST00000164702 249 ntBASIC2.23□□□□□ -2.05
NefmP08553 Cfap61-214ENSMUST00000167179 183 ntBASIC2.23□□□□□ -2.05
NefmP08553 Gm27517-201ENSMUST00000184347 236 ntBASIC2.23□□□□□ -2.05
NefmP08553 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.23□□□□□ -2.05
NefmP08553 Gm36891-201ENSMUST00000191995 655 ntBASIC2.23□□□□□ -2.05
NefmP08553 Gm9227-201ENSMUST00000194733 566 ntBASIC2.23□□□□□ -2.05
NefmP08553 Gm45654-201ENSMUST00000210980 123 ntBASIC2.23□□□□□ -2.05
NefmP08553 Gm13588-201ENSMUST00000120026 135 ntBASIC2.22□□□□□ -2.05
NefmP08553 Gm14287-201ENSMUST00000121060 117 ntBASIC2.22□□□□□ -2.05
NefmP08553 Mir7017-201ENSMUST00000184894 62 ntBASIC2.22□□□□□ -2.05
NefmP08553 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.22□□□□□ -2.05
NefmP08553 Gm45402-201ENSMUST00000211796 223 ntBASIC2.22□□□□□ -2.05
NefmP08553 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.22□□□□□ -2.05
NefmP08553 Gm25207-201ENSMUST00000093745 107 ntBASIC2.22□□□□□ -2.05
NefmP08553 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.22□□□□□ -2.05
NefmP08553 Gm15861-201ENSMUST00000120979 339 ntBASIC2.21□□□□□ -2.06
NefmP08553 Gm25836-201ENSMUST00000158918 123 ntBASIC2.21□□□□□ -2.06
NefmP08553 Gm25314-201ENSMUST00000178810 79 ntBASIC2.21□□□□□ -2.06
NefmP08553 Mir6352-201ENSMUST00000184495 116 ntBASIC2.21□□□□□ -2.06
NefmP08553 Gm27539-201ENSMUST00000184971 224 ntBASIC2.21□□□□□ -2.06
NefmP08553 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.21□□□□□ -2.06
NefmP08553 Gm45815-201ENSMUST00000220241 146 ntBASIC2.21□□□□□ -2.06
NefmP08553 Gm22972-201ENSMUST00000083297 131 ntBASIC2.21□□□□□ -2.06
NefmP08553 Gm25896-201ENSMUST00000083713 136 ntBASIC2.21□□□□□ -2.06
NefmP08553 Gm22723-201ENSMUST00000083820 129 ntBASIC2.21□□□□□ -2.06
NefmP08553 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
NefmP08553 Gm13432-201ENSMUST00000118861 241 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm11835-201ENSMUST00000120635 663 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm14972-201ENSMUST00000121780 364 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm15899-201ENSMUST00000128586 238 ntBASIC2.2□□□□□ -2.06
NefmP08553 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm22217-201ENSMUST00000157556 313 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm26401-201ENSMUST00000158502 76 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm17113-201ENSMUST00000170118 171 ntBASIC2.2□□□□□ -2.06
NefmP08553 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.2□□□□□ -2.06
NefmP08553 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NefmP08553 Gm29005-201ENSMUST00000186773 320 ntBASIC2.2□□□□□ -2.06
NefmP08553 Gm18433-201ENSMUST00000192747 197 ntBASIC2.2□□□□□ -2.06
NefmP08553 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.2□□□□□ -2.06
NefmP08553 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NefmP08553 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
NefmP08553 Gm11854-201ENSMUST00000117839 446 ntBASIC2.19□□□□□ -2.06
NefmP08553 Gm13475-201ENSMUST00000119290 234 ntBASIC2.19□□□□□ -2.06
NefmP08553 Gm24851-201ENSMUST00000158028 103 ntBASIC2.19□□□□□ -2.06
NefmP08553 Gm43578-201ENSMUST00000201250 459 ntBASIC2.19□□□□□ -2.06
NefmP08553 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NefmP08553 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
NefmP08553 Gm23010-201ENSMUST00000104151 126 ntBASIC2.18□□□□□ -2.06
NefmP08553 Gm25541-201ENSMUST00000116888 126 ntBASIC2.18□□□□□ -2.06
NefmP08553 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.18□□□□□ -2.06
NefmP08553 Gm24895-201ENSMUST00000122742 74 ntBASIC2.18□□□□□ -2.06
NefmP08553 Gm22316-201ENSMUST00000158012 216 ntBASIC2.18□□□□□ -2.06
NefmP08553 Gm28453-203ENSMUST00000187041 189 ntBASIC2.18□□□□□ -2.06
NefmP08553 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.18□□□□□ -2.06
NefmP08553 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.18□□□□□ -2.06
NefmP08553 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.18□□□□□ -2.06
NefmP08553 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.18□□□□□ -2.06
NefmP08553 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.18□□□□□ -2.06
NefmP08553 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.18□□□□□ -2.06
NefmP08553 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.18□□□□□ -2.06
NefmP08553 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.18□□□□□ -2.06
NefmP08553 Gm26066-201ENSMUST00000083385 109 ntBASIC2.18□□□□□ -2.06
NefmP08553 Mir148b-201ENSMUST00000083626 97 ntBASIC2.18□□□□□ -2.06
NefmP08553 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.17□□□□□ -2.06
NefmP08553 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
NefmP08553 Gm22713-201ENSMUST00000116895 130 ntBASIC2.17□□□□□ -2.06
NefmP08553 Gm22315-201ENSMUST00000158010 143 ntBASIC2.17□□□□□ -2.06
NefmP08553 Gm22011-201ENSMUST00000158790 123 ntBASIC2.17□□□□□ -2.06
NefmP08553 Gm27236-201ENSMUST00000184147 442 ntBASIC2.17□□□□□ -2.06
NefmP08553 Gm18546-201ENSMUST00000197245 676 ntBASIC2.17□□□□□ -2.06
NefmP08553 Gm45365-201ENSMUST00000209489 256 ntBASIC2.17□□□□□ -2.06
NefmP08553 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.17□□□□□ -2.06
NefmP08553 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
NefmP08553 Gm22761-201ENSMUST00000102278 96 ntBASIC2.16□□□□□ -2.06
NefmP08553 Mir653-201ENSMUST00000102402 85 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms