Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm24630-201ENSMUST00000122768 106 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm25390-201ENSMUST00000157341 103 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm22145-201ENSMUST00000157396 148 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm24478-201ENSMUST00000157439 158 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm22337-201ENSMUST00000157721 132 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm22328-201ENSMUST00000158074 112 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm24885-201ENSMUST00000158783 270 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.58□□□□□ -2
Col3a1P08121 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.58□□□□□ -2
Col3a1P08121 Gm45101-201ENSMUST00000208327 232 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm45403-201ENSMUST00000209453 276 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm46194-201ENSMUST00000218136 320 ntBASIC2.58□□□□□ -2
Col3a1P08121 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.58□□□□□ -2
Col3a1P08121 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.58□□□□□ -2
Col3a1P08121 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm4916-201ENSMUST00000126139 642 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.58□□□□□ -2
Col3a1P08121 Gm24676-201ENSMUST00000158758 75 ntBASIC2.58□□□□□ -2
Col3a1P08121 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm27851-201ENSMUST00000183529 63 ntBASIC2.58□□□□□ -2
Col3a1P08121 Mir8116-201ENSMUST00000184134 97 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.58□□□□□ -2
Col3a1P08121 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm37089-201ENSMUST00000195616 129 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm34073-201ENSMUST00000195736 212 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm44391-201ENSMUST00000198490 93 ntBASIC2.58□□□□□ -2
Col3a1P08121 Gm44881-201ENSMUST00000205425 367 ntBASIC2.58□□□□□ -2
Col3a1P08121 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.58□□□□□ -2
Col3a1P08121 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.58□□□□□ -2
Col3a1P08121 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col3a1P08121 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm26147-201ENSMUST00000104479 114 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm14657-201ENSMUST00000117461 302 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm14008-201ENSMUST00000120483 274 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm14846-201ENSMUST00000121868 216 ntBASIC2.57□□□□□ -2
Col3a1P08121 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm14402-201ENSMUST00000122217 508 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm24629-201ENSMUST00000122762 89 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm23043-201ENSMUST00000157890 109 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm27545-201ENSMUST00000184755 202 ntBASIC2.57□□□□□ -2
Col3a1P08121 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col3a1P08121 Gm36946-201ENSMUST00000192706 435 ntBASIC2.57□□□□□ -2
Col3a1P08121 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm7726-201ENSMUST00000206241 231 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm26454-201ENSMUST00000082682 107 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm24661-201ENSMUST00000083205 104 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm24410-201ENSMUST00000083433 107 ntBASIC2.57□□□□□ -2
Col3a1P08121 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.57□□□□□ -2
Col3a1P08121 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col3a1P08121 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col3a1P08121 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col3a1P08121 Gm24423-201ENSMUST00000101982 106 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm6444-201ENSMUST00000119611 458 ntBASIC2.56□□□□□ -2
Col3a1P08121 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm14694-201ENSMUST00000121856 282 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm26345-201ENSMUST00000157534 120 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm24900-201ENSMUST00000158128 134 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm25654-201ENSMUST00000158467 88 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm16326-201ENSMUST00000162843 414 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm26701-201ENSMUST00000181571 234 ntBASIC2.56□□□□□ -2
Col3a1P08121 Mir3087-201ENSMUST00000199405 56 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.56□□□□□ -2
Col3a1P08121 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.56□□□□□ -2
Col3a1P08121 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col3a1P08121 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col3a1P08121 Gm26066-201ENSMUST00000083385 109 ntBASIC2.56□□□□□ -2
Col3a1P08121 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.56□□□□□ -2
Col3a1P08121 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col3a1P08121 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.55□□□□□ -2
Col3a1P08121 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col3a1P08121 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.55□□□□□ -2
Col3a1P08121 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm24121-201ENSMUST00000102029 106 ntBASIC2.55□□□□□ -2
Col3a1P08121 Mir542-201ENSMUST00000102186 85 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col3a1P08121 Gm24907-201ENSMUST00000116932 128 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm11429-201ENSMUST00000119089 144 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm13424-201ENSMUST00000122301 354 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm27510-201ENSMUST00000158214 64 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm24666-201ENSMUST00000158937 167 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm7592-201ENSMUST00000160674 627 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm24811-201ENSMUST00000175313 100 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col3a1P08121 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.55□□□□□ -2
Col3a1P08121 Gm46993-201ENSMUST00000220708 259 ntBASIC2.55□□□□□ -2
Col3a1P08121 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.55□□□□□ -2
Col3a1P08121 Gm22828-201ENSMUST00000083768 107 ntBASIC2.55□□□□□ -2
Col3a1P08121 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col3a1P08121 Gm14880-201ENSMUST00000117581 292 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm16032-201ENSMUST00000118534 168 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm15162-201ENSMUST00000119325 283 ntBASIC2.54□□□□□ -2
Col3a1P08121 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm12640-201ENSMUST00000120097 310 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm13729-201ENSMUST00000120328 406 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm25051-201ENSMUST00000158602 249 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm2962-201ENSMUST00000159266 336 ntBASIC2.54□□□□□ -2
Col3a1P08121 Gm22858-201ENSMUST00000174972 76 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms