Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm23015-201ENSMUST00000104145 128 ntBASIC1.92□□□□□ -2.1
P04224 Gm12412-201ENSMUST00000121867 328 ntBASIC1.92□□□□□ -2.1
P04224 Gm24504-201ENSMUST00000157679 100 ntBASIC1.92□□□□□ -2.1
P04224 Gm25866-201ENSMUST00000158245 112 ntBASIC1.92□□□□□ -2.1
P04224 Gm16561-201ENSMUST00000163001 192 ntBASIC1.92□□□□□ -2.1
P04224 Gm26400-201ENSMUST00000175012 85 ntBASIC1.92□□□□□ -2.1
P04224 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.92□□□□□ -2.1
P04224 Gm5900-201ENSMUST00000179862 375 ntBASIC1.92□□□□□ -2.1
P04224 Gm29107-201ENSMUST00000190910 347 ntBASIC1.92□□□□□ -2.1
P04224 Gm28288-201ENSMUST00000191019 214 ntBASIC1.92□□□□□ -2.1
P04224 AC150314.1-201ENSMUST00000214798 238 ntBASIC1.92□□□□□ -2.1
P04224 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.92□□□□□ -2.1
P04224 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.92□□□□□ -2.1
P04224 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.92□□□□□ -2.1
P04224 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.91□□□□□ -2.1
P04224 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.91□□□□□ -2.1
P04224 Gm23142-201ENSMUST00000101848 105 ntBASIC1.91□□□□□ -2.1
P04224 Gm26240-201ENSMUST00000101893 105 ntBASIC1.91□□□□□ -2.1
P04224 Gm22517-201ENSMUST00000158265 136 ntBASIC1.91□□□□□ -2.1
P04224 Gm23005-201ENSMUST00000158950 136 ntBASIC1.91□□□□□ -2.1
P04224 Gm23090-201ENSMUST00000177331 78 ntBASIC1.91□□□□□ -2.1
P04224 Gm29229-201ENSMUST00000188874 323 ntBASIC1.91□□□□□ -2.1
P04224 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.91□□□□□ -2.1
P04224 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.91□□□□□ -2.1
P04224 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.91□□□□□ -2.1
P04224 Gm10264-201ENSMUST00000220589 429 ntBASIC1.91□□□□□ -2.1
P04224 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
P04224 Snord42a-201ENSMUST00000082606 65 ntBASIC1.91□□□□□ -2.1
P04224 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
P04224 Gm22752-201ENSMUST00000102083 109 ntBASIC1.9□□□□□ -2.11
P04224 Gm22488-201ENSMUST00000116811 127 ntBASIC1.9□□□□□ -2.11
P04224 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.9□□□□□ -2.11
P04224 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
P04224 Gm26150-201ENSMUST00000157426 151 ntBASIC1.9□□□□□ -2.11
P04224 Gm23535-201ENSMUST00000157542 106 ntBASIC1.9□□□□□ -2.11
P04224 Gm43993-201ENSMUST00000203972 247 ntBASIC1.9□□□□□ -2.11
P04224 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.9□□□□□ -2.11
P04224 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
P04224 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
P04224 CT009504.1-201ENSMUST00000218252 3330 ntBASIC1.89□□□□□ -2.11
P04224 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
P04224 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.89□□□□□ -2.11
P04224 Gm24079-201ENSMUST00000104352 132 ntBASIC1.89□□□□□ -2.11
P04224 Gm22021-201ENSMUST00000104353 107 ntBASIC1.89□□□□□ -2.11
P04224 Gm11854-201ENSMUST00000117839 446 ntBASIC1.89□□□□□ -2.11
P04224 Gm11420-201ENSMUST00000120047 402 ntBASIC1.89□□□□□ -2.11
P04224 Gm22598-201ENSMUST00000157600 127 ntBASIC1.89□□□□□ -2.11
P04224 Gm24783-201ENSMUST00000157639 100 ntBASIC1.89□□□□□ -2.11
P04224 Gm22085-201ENSMUST00000158344 110 ntBASIC1.89□□□□□ -2.11
P04224 Gm23181-201ENSMUST00000158685 110 ntBASIC1.89□□□□□ -2.11
P04224 Gm23921-201ENSMUST00000175258 107 ntBASIC1.89□□□□□ -2.11
P04224 Gm27271-201ENSMUST00000183509 170 ntBASIC1.89□□□□□ -2.11
P04224 Gm36891-201ENSMUST00000191995 655 ntBASIC1.89□□□□□ -2.11
P04224 Gm37081-201ENSMUST00000192034 196 ntBASIC1.89□□□□□ -2.11
P04224 Gm43578-201ENSMUST00000201250 459 ntBASIC1.89□□□□□ -2.11
P04224 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
P04224 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.89□□□□□ -2.11
P04224 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.89□□□□□ -2.11
P04224 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.89□□□□□ -2.11
P04224 Gm24625-201ENSMUST00000082622 130 ntBASIC1.89□□□□□ -2.11
P04224 Mir496a-201ENSMUST00000093627 79 ntBASIC1.89□□□□□ -2.11
P04224 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
P04224 Gm15526-201ENSMUST00000112504 204 ntBASIC1.88□□□□□ -2.11
P04224 Gm22538-201ENSMUST00000158169 299 ntBASIC1.88□□□□□ -2.11
P04224 Gm22534-201ENSMUST00000158173 104 ntBASIC1.88□□□□□ -2.11
P04224 Gm25224-201ENSMUST00000158195 68 ntBASIC1.88□□□□□ -2.11
P04224 Gm24390-201ENSMUST00000179578 62 ntBASIC1.88□□□□□ -2.11
P04224 Gm26864-201ENSMUST00000181346 156 ntBASIC1.88□□□□□ -2.11
P04224 Mir6995-201ENSMUST00000183658 71 ntBASIC1.88□□□□□ -2.11
P04224 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.88□□□□□ -2.11
P04224 Gm45456-201ENSMUST00000210841 243 ntBASIC1.88□□□□□ -2.11
P04224 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.88□□□□□ -2.11
P04224 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
P04224 Gm24536-201ENSMUST00000083144 107 ntBASIC1.88□□□□□ -2.11
P04224 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
P04224 Mir1b-201ENSMUST00000117012 122 ntBASIC1.87□□□□□ -2.11
P04224 Gm13518-201ENSMUST00000120018 233 ntBASIC1.87□□□□□ -2.11
P04224 Gm24937-201ENSMUST00000122597 134 ntBASIC1.87□□□□□ -2.11
P04224 Gm22080-201ENSMUST00000157591 106 ntBASIC1.87□□□□□ -2.11
P04224 Mir1936-201ENSMUST00000158699 93 ntBASIC1.87□□□□□ -2.11
P04224 Gm16162-201ENSMUST00000162296 297 ntBASIC1.87□□□□□ -2.11
P04224 Gm25748-201ENSMUST00000175487 70 ntBASIC1.87□□□□□ -2.11
P04224 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.87□□□□□ -2.11
P04224 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.87□□□□□ -2.11
P04224 Gm27793-201ENSMUST00000183405 76 ntBASIC1.87□□□□□ -2.11
P04224 Mir6388-201ENSMUST00000184417 75 ntBASIC1.87□□□□□ -2.11
P04224 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.87□□□□□ -2.11
P04224 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.87□□□□□ -2.11
P04224 Snord118-201ENSMUST00000082965 135 ntBASIC1.87□□□□□ -2.11
P04224 Snora69-201ENSMUST00000083708 131 ntBASIC1.87□□□□□ -2.11
P04224 Gm26329-201ENSMUST00000093723 110 ntBASIC1.87□□□□□ -2.11
P04224 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
P04224 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
P04224 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.86□□□□□ -2.11
P04224 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.86□□□□□ -2.11
P04224 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.86□□□□□ -2.11
P04224 Gm11935-201ENSMUST00000118608 399 ntBASIC1.86□□□□□ -2.11
P04224 Gm14845-201ENSMUST00000121259 306 ntBASIC1.86□□□□□ -2.11
P04224 Gm25805-201ENSMUST00000122788 108 ntBASIC1.86□□□□□ -2.11
P04224 Gm23548-201ENSMUST00000158963 106 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms