Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.45□□□□□ -1.86
Vti1aO89116 Gm16533-201ENSMUST00000140035 228 ntBASIC3.45□□□□□ -1.86
Vti1aO89116 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.45□□□□□ -1.86
Vti1aO89116 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.45□□□□□ -1.86
Vti1aO89116 Gm22527-201ENSMUST00000158816 106 ntBASIC3.45□□□□□ -1.86
Vti1aO89116 Mir5127-201ENSMUST00000175295 71 ntBASIC3.45□□□□□ -1.86
Vti1aO89116 Gm27783-201ENSMUST00000183534 105 ntBASIC3.45□□□□□ -1.86
Vti1aO89116 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.45□□□□□ -1.86
Vti1aO89116 Gm44399-201ENSMUST00000205043 226 ntBASIC3.45□□□□□ -1.86
Vti1aO89116 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.45□□□□□ -1.86
Vti1aO89116 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.45□□□□□ -1.86
Vti1aO89116 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Vti1aO89116 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Vti1aO89116 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Vti1aO89116 Gm22270-201ENSMUST00000104034 132 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Mir878-201ENSMUST00000104680 78 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm24132-201ENSMUST00000104745 91 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm11786-201ENSMUST00000120799 155 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm11414-201ENSMUST00000121795 263 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm26099-201ENSMUST00000157248 109 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm22217-201ENSMUST00000157556 313 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm25914-201ENSMUST00000157618 153 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm25020-201ENSMUST00000178071 107 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Mir6917-201ENSMUST00000184111 61 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm19901-201ENSMUST00000192191 495 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.44□□□□□ -1.86
Vti1aO89116 Gm44223-201ENSMUST00000204854 114 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm22249-201ENSMUST00000082485 136 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Gm23615-201ENSMUST00000082602 65 ntBASIC3.44□□□□□ -1.86
Vti1aO89116 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Vti1aO89116 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Vti1aO89116 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Vti1aO89116 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Vti1aO89116 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Vti1aO89116 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Vti1aO89116 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
Vti1aO89116 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
Vti1aO89116 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Vti1aO89116 Gm26423-201ENSMUST00000104277 128 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm12512-201ENSMUST00000119620 217 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm23535-201ENSMUST00000157542 106 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm25373-201ENSMUST00000158156 115 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm25051-201ENSMUST00000158602 249 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm27753-201ENSMUST00000184742 203 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm28002-201ENSMUST00000184832 100 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm19790-201ENSMUST00000214414 251 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Gm24762-201ENSMUST00000083689 104 ntBASIC3.43□□□□□ -1.86
Vti1aO89116 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Vti1aO89116 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Vti1aO89116 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.43□□□□□ -1.86
Vti1aO89116 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Vti1aO89116 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Vti1aO89116 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vti1aO89116 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Vti1aO89116 Gm22658-201ENSMUST00000104196 155 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm25539-201ENSMUST00000116886 122 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.42□□□□□ -1.86
Vti1aO89116 Gm20672-201ENSMUST00000176605 261 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm28358-202ENSMUST00000189292 223 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.42□□□□□ -1.86
Vti1aO89116 Trbv18-201ENSMUST00000194256 294 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm18433-202ENSMUST00000195682 196 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm43193-201ENSMUST00000197732 441 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm43427-201ENSMUST00000198188 331 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm43901-201ENSMUST00000203247 453 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm43899-201ENSMUST00000203675 246 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm25789-201ENSMUST00000083294 76 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.42□□□□□ -1.86
Vti1aO89116 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Vti1aO89116 Mir1198-201ENSMUST00000116995 121 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm13761-201ENSMUST00000117238 807 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm12155-201ENSMUST00000121267 160 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm23380-201ENSMUST00000158448 103 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm22853-201ENSMUST00000174974 131 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm44459-201ENSMUST00000203926 160 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.41□□□□□ -1.86
Vti1aO89116 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm22979-201ENSMUST00000082609 159 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.41□□□□□ -1.86
Vti1aO89116 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Vti1aO89116 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Vti1aO89116 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Vti1aO89116 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Vti1aO89116 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Vti1aO89116 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Vti1aO89116 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Vti1aO89116 Gm12550-201ENSMUST00000118478 329 ntBASIC3.4□□□□□ -1.87
Vti1aO89116 Gm15190-201ENSMUST00000120855 276 ntBASIC3.4□□□□□ -1.87
Vti1aO89116 Gm17166-201ENSMUST00000172006 431 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 257 ms