Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Mir6379-201ENSMUST00000183392 115 ntBASIC1.87□□□□□ -2.11
ClppO88696 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
ClppO88696 Gm44564-201ENSMUST00000207985 180 ntBASIC1.87□□□□□ -2.11
ClppO88696 Gm45704-201ENSMUST00000212582 403 ntBASIC1.87□□□□□ -2.11
ClppO88696 Gm33654-201ENSMUST00000221704 215 ntBASIC1.87□□□□□ -2.11
ClppO88696 Gm21937-201ENSMUST00000222825 218 ntBASIC1.87□□□□□ -2.11
ClppO88696 Gm25788-201ENSMUST00000082721 131 ntBASIC1.87□□□□□ -2.11
ClppO88696 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
ClppO88696 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.87□□□□□ -2.11
ClppO88696 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.86□□□□□ -2.11
ClppO88696 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
ClppO88696 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.86□□□□□ -2.11
ClppO88696 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.86□□□□□ -2.11
ClppO88696 Gm27926-201ENSMUST00000157180 66 ntBASIC1.86□□□□□ -2.11
ClppO88696 Gm22435-201ENSMUST00000158552 128 ntBASIC1.86□□□□□ -2.11
ClppO88696 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.86□□□□□ -2.11
ClppO88696 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.86□□□□□ -2.11
ClppO88696 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ClppO88696 Gm42807-201ENSMUST00000200141 329 ntBASIC1.86□□□□□ -2.11
ClppO88696 Gm44408-201ENSMUST00000200205 66 ntBASIC1.86□□□□□ -2.11
ClppO88696 Gm44666-201ENSMUST00000208544 391 ntBASIC1.86□□□□□ -2.11
ClppO88696 Gm45365-201ENSMUST00000209489 256 ntBASIC1.86□□□□□ -2.11
ClppO88696 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.86□□□□□ -2.11
ClppO88696 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.86□□□□□ -2.11
ClppO88696 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.86□□□□□ -2.11
ClppO88696 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.86□□□□□ -2.11
ClppO88696 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ClppO88696 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ClppO88696 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
ClppO88696 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ClppO88696 Gm25059-201ENSMUST00000157367 117 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm24480-201ENSMUST00000157442 103 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm24726-201ENSMUST00000158232 121 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm24005-201ENSMUST00000158459 296 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm24837-201ENSMUST00000158683 81 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.85□□□□□ -2.11
ClppO88696 Gm7592-201ENSMUST00000160674 627 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm27878-201ENSMUST00000184000 106 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm37778-201ENSMUST00000191732 190 ntBASIC1.85□□□□□ -2.11
ClppO88696 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.85□□□□□ -2.11
ClppO88696 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ClppO88696 Gm44429-201ENSMUST00000203542 186 ntBASIC1.85□□□□□ -2.11
ClppO88696 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.85□□□□□ -2.11
ClppO88696 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm26175-201ENSMUST00000083794 131 ntBASIC1.85□□□□□ -2.11
ClppO88696 Gm23230-201ENSMUST00000157298 133 ntBASIC1.84□□□□□ -2.11
ClppO88696 Mir28b-201ENSMUST00000175399 80 ntBASIC1.84□□□□□ -2.11
ClppO88696 Mir6346-201ENSMUST00000183982 81 ntBASIC1.84□□□□□ -2.11
ClppO88696 Mir6950-201ENSMUST00000184438 73 ntBASIC1.84□□□□□ -2.11
ClppO88696 Mir7678-201ENSMUST00000185076 71 ntBASIC1.84□□□□□ -2.11
ClppO88696 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
ClppO88696 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.84□□□□□ -2.11
ClppO88696 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ClppO88696 Gm43472-201ENSMUST00000200175 154 ntBASIC1.84□□□□□ -2.11
ClppO88696 Gm7495-201ENSMUST00000215099 426 ntBASIC1.84□□□□□ -2.11
ClppO88696 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.84□□□□□ -2.11
ClppO88696 Gm25589-201ENSMUST00000082502 166 ntBASIC1.84□□□□□ -2.11
ClppO88696 Mir107-201ENSMUST00000083660 87 ntBASIC1.84□□□□□ -2.11
ClppO88696 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.84□□□□□ -2.12
ClppO88696 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ClppO88696 Gm22713-201ENSMUST00000116895 130 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm11786-201ENSMUST00000120799 155 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm25970-201ENSMUST00000157165 86 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm26024-201ENSMUST00000158657 322 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm26157-201ENSMUST00000158974 126 ntBASIC1.83□□□□□ -2.12
ClppO88696 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm44482-201ENSMUST00000199232 103 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm43583-201ENSMUST00000199235 303 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm44149-201ENSMUST00000204256 226 ntBASIC1.83□□□□□ -2.12
ClppO88696 Gm5023-201ENSMUST00000217442 587 ntBASIC1.83□□□□□ -2.12
ClppO88696 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.83□□□□□ -2.12
ClppO88696 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ClppO88696 Gm24043-201ENSMUST00000083108 116 ntBASIC1.83□□□□□ -2.12
ClppO88696 Snora33-201ENSMUST00000093556 129 ntBASIC1.83□□□□□ -2.12
ClppO88696 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ClppO88696 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.82□□□□□ -2.12
ClppO88696 Gm22386-201ENSMUST00000158192 129 ntBASIC1.82□□□□□ -2.12
ClppO88696 Gm27544-201ENSMUST00000185069 155 ntBASIC1.82□□□□□ -2.12
ClppO88696 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.82□□□□□ -2.12
ClppO88696 Gm38050-201ENSMUST00000191904 238 ntBASIC1.82□□□□□ -2.12
ClppO88696 Gm43624-201ENSMUST00000197368 180 ntBASIC1.82□□□□□ -2.12
ClppO88696 Snord43-201ENSMUST00000199549 108 ntBASIC1.82□□□□□ -2.12
ClppO88696 Gm43578-201ENSMUST00000201250 459 ntBASIC1.82□□□□□ -2.12
ClppO88696 Gm45296-201ENSMUST00000209625 205 ntBASIC1.82□□□□□ -2.12
ClppO88696 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.82□□□□□ -2.12
ClppO88696 Gm26164-201ENSMUST00000083793 104 ntBASIC1.82□□□□□ -2.12
ClppO88696 Gm26314-201ENSMUST00000083891 107 ntBASIC1.82□□□□□ -2.12
ClppO88696 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
ClppO88696 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ClppO88696 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm25543-201ENSMUST00000122678 312 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm24896-201ENSMUST00000122741 135 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm25909-201ENSMUST00000157619 121 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm24853-201ENSMUST00000158026 121 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm17100-201ENSMUST00000168963 272 ntBASIC1.81□□□□□ -2.12
ClppO88696 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
ClppO88696 Gm7258-201ENSMUST00000179317 300 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm23186-201ENSMUST00000180078 107 ntBASIC1.81□□□□□ -2.12
ClppO88696 Gm26864-201ENSMUST00000181346 156 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms