Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm11936-201ENSMUST00000118323 160 ntBASIC2.46□□□□□ -2.02
Cbx4O55187 Gm12646-201ENSMUST00000119144 238 ntBASIC2.46□□□□□ -2.02
Cbx4O55187 Gm11471-201ENSMUST00000121824 198 ntBASIC2.46□□□□□ -2.02
Cbx4O55187 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.46□□□□□ -2.02
Cbx4O55187 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.46□□□□□ -2.02
Cbx4O55187 Gm24922-201ENSMUST00000158511 102 ntBASIC2.46□□□□□ -2.02
Cbx4O55187 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Cbx4O55187 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cbx4O55187 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.46□□□□□ -2.02
Cbx4O55187 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.46□□□□□ -2.02
Cbx4O55187 Mir376a-201ENSMUST00000197584 68 ntBASIC2.46□□□□□ -2.02
Cbx4O55187 Gm29818-201ENSMUST00000218070 165 ntBASIC2.46□□□□□ -2.02
Cbx4O55187 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cbx4O55187 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cbx4O55187 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Cbx4O55187 Gm25805-201ENSMUST00000122788 108 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 Gm24475-201ENSMUST00000157435 143 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 Gm25020-201ENSMUST00000178071 107 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 Gm43193-201ENSMUST00000197732 441 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.45□□□□□ -2.02
Cbx4O55187 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 Gm22978-201ENSMUST00000082607 160 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cbx4O55187 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.45□□□□□ -2.02
Cbx4O55187 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cbx4O55187 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Cbx4O55187 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Mir682-201ENSMUST00000102281 96 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Snora36b-201ENSMUST00000104383 132 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm22486-201ENSMUST00000116815 137 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm5396-201ENSMUST00000121222 532 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm23223-201ENSMUST00000158119 127 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm23047-201ENSMUST00000177661 94 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm24388-201ENSMUST00000177872 107 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Mir7013-201ENSMUST00000183540 72 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Mir6399-201ENSMUST00000184050 84 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.44□□□□□ -2.02
Cbx4O55187 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.44□□□□□ -2.02
Cbx4O55187 Gm28647-201ENSMUST00000188416 197 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cbx4O55187 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm44966-201ENSMUST00000208096 157 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm25199-201ENSMUST00000083095 104 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm23040-201ENSMUST00000083869 163 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.44□□□□□ -2.02
Cbx4O55187 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cbx4O55187 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cbx4O55187 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm12513-201ENSMUST00000118617 352 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm6574-201ENSMUST00000120037 362 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm14775-201ENSMUST00000122089 310 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm25625-201ENSMUST00000157221 96 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm24911-201ENSMUST00000157292 136 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm23542-201ENSMUST00000158208 96 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Mir7062-201ENSMUST00000185038 66 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm29140-201ENSMUST00000190187 476 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Gm45344-201ENSMUST00000211610 341 ntBASIC2.43□□□□□ -2.02
Cbx4O55187 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Cbx4O55187 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Cbx4O55187 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cbx4O55187 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cbx4O55187 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Cbx4O55187 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Cbx4O55187 Gm24670-201ENSMUST00000104154 132 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm22674-201ENSMUST00000104413 131 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm26249-201ENSMUST00000116708 118 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Mir1b-201ENSMUST00000117012 122 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm14770-201ENSMUST00000122197 312 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.42□□□□□ -2.02
Cbx4O55187 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.42□□□□□ -2.02
Cbx4O55187 Gm25457-201ENSMUST00000179509 107 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Mir6386-201ENSMUST00000183558 104 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.42□□□□□ -2.02
Cbx4O55187 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm45365-201ENSMUST00000209489 256 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cbx4O55187 Gm22622-201ENSMUST00000082870 129 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm22294-201ENSMUST00000083308 104 ntBASIC2.42□□□□□ -2.02
Cbx4O55187 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.42□□□□□ -2.02
Cbx4O55187 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cbx4O55187 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cbx4O55187 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Gm26473-201ENSMUST00000116763 127 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Gm14602-201ENSMUST00000118625 340 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.41□□□□□ -2.02
Cbx4O55187 Gm26186-201ENSMUST00000157689 125 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Gm24212-201ENSMUST00000158258 132 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Gm27271-201ENSMUST00000183509 170 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Gm27761-201ENSMUST00000184091 131 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.41□□□□□ -2.02
Cbx4O55187 Gm2829-201ENSMUST00000213121 499 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.41□□□□□ -2.02
Cbx4O55187 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms