Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.93□□□□□ -2.1
Cldn5O54942 Gm45296-201ENSMUST00000209625 205 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.93□□□□□ -2.1
Cldn5O54942 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 Gm33654-201ENSMUST00000221704 215 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 Gm21937-201ENSMUST00000222825 218 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 Snord68-201ENSMUST00000082516 86 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 Snora34-201ENSMUST00000083402 138 ntBASIC1.93□□□□□ -2.1
Cldn5O54942 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Cldn5O54942 Gm26396-201ENSMUST00000104093 132 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Gm13439-201ENSMUST00000117541 409 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Gm26024-201ENSMUST00000158657 322 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Mir3086-201ENSMUST00000175072 87 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
Cldn5O54942 Gm42960-201ENSMUST00000202160 241 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Cldn5O54942 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Gm26164-201ENSMUST00000083793 104 ntBASIC1.92□□□□□ -2.1
Cldn5O54942 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cldn5O54942 Gm11786-201ENSMUST00000120799 155 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.91□□□□□ -2.1
Cldn5O54942 Gm7953-201ENSMUST00000168278 469 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Gm27544-201ENSMUST00000185069 155 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Gm28414-201ENSMUST00000190111 294 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Gm37778-201ENSMUST00000191732 190 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Gm45654-201ENSMUST00000210980 123 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Gm22299-201ENSMUST00000082663 136 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Cldn5O54942 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.91□□□□□ -2.1
Cldn5O54942 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Cldn5O54942 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Cldn5O54942 Gm25090-201ENSMUST00000104000 132 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 Gm14296-202ENSMUST00000108931 750 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Cldn5O54942 Mir6346-201ENSMUST00000183982 81 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 Mir6352-201ENSMUST00000184495 116 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.9□□□□□ -2.11
Cldn5O54942 Gm37162-201ENSMUST00000191708 551 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Cldn5O54942 Gm44655-201ENSMUST00000207768 423 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.9□□□□□ -2.11
Cldn5O54942 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Cldn5O54942 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm13729-201ENSMUST00000120328 406 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.89□□□□□ -2.11
Cldn5O54942 Gm25970-201ENSMUST00000157165 86 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm23670-201ENSMUST00000157469 119 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm22113-201ENSMUST00000158343 104 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.89□□□□□ -2.11
Cldn5O54942 Gm26194-201ENSMUST00000175036 71 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm29397-201ENSMUST00000185205 333 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cldn5O54942 Gm37579-201ENSMUST00000194291 142 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm26922-201ENSMUST00000082687 72 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm25402-201ENSMUST00000082966 131 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm23731-201ENSMUST00000083749 107 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm23041-201ENSMUST00000083868 106 ntBASIC1.89□□□□□ -2.11
Cldn5O54942 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cldn5O54942 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Cldn5O54942 Gm25421-201ENSMUST00000104218 164 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm26249-201ENSMUST00000116708 118 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm22193-201ENSMUST00000116868 76 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm12351-201ENSMUST00000118727 292 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm13432-201ENSMUST00000118861 241 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.88□□□□□ -2.11
Cldn5O54942 Gm5900-201ENSMUST00000179862 375 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Mir6950-201ENSMUST00000184438 73 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Cldn5O54942 Gm43624-201ENSMUST00000197368 180 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm23721-201ENSMUST00000083005 107 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm26056-201ENSMUST00000083043 104 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm24977-201ENSMUST00000083106 163 ntBASIC1.88□□□□□ -2.11
Cldn5O54942 Gm6829-201ENSMUST00000119858 360 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm13396-201ENSMUST00000120617 271 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Cldn5O54942 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.87□□□□□ -2.11
Cldn5O54942 Gm25909-201ENSMUST00000157619 121 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm24853-201ENSMUST00000158026 121 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm22768-201ENSMUST00000158366 153 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm20462-201ENSMUST00000172623 408 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm20438-201ENSMUST00000174441 329 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Cldn5O54942 Gm21885-201ENSMUST00000178891 327 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm9892-201ENSMUST00000182415 992 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.87□□□□□ -2.11
Cldn5O54942 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.87□□□□□ -2.11
Cldn5O54942 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms