Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm23034-201ENSMUST00000158001 147 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm25491-201ENSMUST00000158733 308 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm24862-201ENSMUST00000179103 79 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm23310-201ENSMUST00000179105 79 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm25461-201ENSMUST00000179293 79 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm24306-201ENSMUST00000180229 79 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm19901-201ENSMUST00000192191 495 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm5899-201ENSMUST00000071770 270 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Hmgb3O54879 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm23106-201ENSMUST00000157554 101 ntBASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm22515-201ENSMUST00000158273 305 ntBASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm20689-201ENSMUST00000176033 279 ntBASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm44870-201ENSMUST00000207291 357 ntBASIC0.5□□□□□ -2.33
Hmgb3O54879 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.5□□□□□ -2.33
Hmgb3O54879 Snord32a-201ENSMUST00000083285 83 ntBASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.5□□□□□ -2.33
Hmgb3O54879 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm23422-201ENSMUST00000102000 107 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Mir706-201ENSMUST00000102262 84 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm23836-201ENSMUST00000104434 129 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm25706-201ENSMUST00000157828 247 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Mir7665-201ENSMUST00000184907 63 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm38231-201ENSMUST00000192030 347 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm37709-201ENSMUST00000195074 600 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm42533-201ENSMUST00000196247 157 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm44754-201ENSMUST00000208155 400 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm25636-201ENSMUST00000082666 133 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Mir216a-201ENSMUST00000083605 72 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.49□□□□□ -2.33
Hmgb3O54879 Gm22750-201ENSMUST00000102076 103 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm25485-201ENSMUST00000104120 132 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm4732-201ENSMUST00000118778 473 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm15077-201ENSMUST00000122344 362 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm23114-201ENSMUST00000158478 117 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm16038-201ENSMUST00000159317 193 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm24518-201ENSMUST00000180275 94 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm26968-201ENSMUST00000182894 481 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm43250-201ENSMUST00000196536 273 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm40810-201ENSMUST00000219149 253 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Mir33-201ENSMUST00000083531 69 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.48□□□□□ -2.33
Hmgb3O54879 Gm26339-201ENSMUST00000102368 99 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm23766-201ENSMUST00000103894 80 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm22543-201ENSMUST00000104347 94 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm14980-201ENSMUST00000121247 736 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm23000-201ENSMUST00000157083 139 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm22236-201ENSMUST00000157093 106 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm25011-201ENSMUST00000158398 126 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm17100-201ENSMUST00000168963 272 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm24510-201ENSMUST00000174965 94 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm23967-201ENSMUST00000175062 78 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm26236-201ENSMUST00000175536 137 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Hmgb3O54879 Mir7663-201ENSMUST00000183950 61 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm19855-201ENSMUST00000210145 249 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.47□□□□□ -2.33
Hmgb3O54879 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm22306-201ENSMUST00000082692 107 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Mir362-201ENSMUST00000093592 65 ntBASIC0.47□□□□□ -2.33
Hmgb3O54879 Gm22831-201ENSMUST00000102473 109 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Gm13457-201ENSMUST00000117885 267 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Gm14713-201ENSMUST00000122362 686 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Gm25166-201ENSMUST00000158909 111 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Mir3109-201ENSMUST00000175301 88 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Gm43898-201ENSMUST00000204456 424 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Gm18188-201ENSMUST00000219386 478 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Hmgb3O54879 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC0.46□□□□□ -2.34
Hmgb3O54879 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.46□□□□□ -2.34
Hmgb3O54879 Gm12779-201ENSMUST00000121496 143 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm25784-201ENSMUST00000122524 81 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm24401-201ENSMUST00000157868 91 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm25715-201ENSMUST00000158627 125 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm18396-201ENSMUST00000177095 361 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm26914-201ENSMUST00000182262 223 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm27326-201ENSMUST00000183504 95 ntBASIC0.45□□□□□ -2.34
Hmgb3O54879 Gm27545-201ENSMUST00000184755 202 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms