Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
Sdc4O35988 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Sdc4O35988 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.66□□□□□ -2.3
Sdc4O35988 Gm14355-201ENSMUST00000117352 264 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm14362-201ENSMUST00000121679 273 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm14364-201ENSMUST00000129209 267 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm15254-201ENSMUST00000149567 273 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm22236-201ENSMUST00000157093 106 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm23277-201ENSMUST00000157914 136 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm22668-201ENSMUST00000158716 260 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm20689-201ENSMUST00000176033 279 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Sdc4O35988 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Sdc4O35988 Gm28409-201ENSMUST00000187064 103 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.66□□□□□ -2.3
Sdc4O35988 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Gm43914-201ENSMUST00000203592 594 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.66□□□□□ -2.3
Sdc4O35988 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Sdc4O35988 Gm13992-201ENSMUST00000120558 156 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm14980-201ENSMUST00000121247 736 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm16265-201ENSMUST00000134558 108 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm23331-201ENSMUST00000157423 108 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm23589-201ENSMUST00000157660 105 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm23819-201ENSMUST00000158744 109 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm10177-202ENSMUST00000161698 207 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm17052-201ENSMUST00000165496 289 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.65□□□□□ -2.31
Sdc4O35988 Gm22929-201ENSMUST00000175517 107 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm38231-201ENSMUST00000192030 347 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm38268-201ENSMUST00000195813 193 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm18703-201ENSMUST00000215318 333 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 AC156574.2-201ENSMUST00000228023 282 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm25038-201ENSMUST00000082928 130 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Snord118-201ENSMUST00000082965 135 ntBASIC0.65□□□□□ -2.31
Sdc4O35988 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Sdc4O35988 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm24340-201ENSMUST00000104208 97 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm14989-201ENSMUST00000120497 207 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm25269-201ENSMUST00000122601 104 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.64□□□□□ -2.31
Sdc4O35988 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm28560-201ENSMUST00000186091 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm28334-201ENSMUST00000186653 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm28495-201ENSMUST00000188452 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm28232-201ENSMUST00000188683 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm28481-201ENSMUST00000189231 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm29059-201ENSMUST00000191534 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm37765-201ENSMUST00000192395 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm37237-201ENSMUST00000192893 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm36968-201ENSMUST00000193737 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm38290-201ENSMUST00000195238 315 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm42570-201ENSMUST00000195937 292 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.64□□□□□ -2.31
Sdc4O35988 Gm44954-201ENSMUST00000208513 227 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
Sdc4O35988 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm24977-201ENSMUST00000083106 163 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm25128-201ENSMUST00000083339 76 ntBASIC0.64□□□□□ -2.31
Sdc4O35988 Gm24808-201ENSMUST00000157993 118 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Gm24221-201ENSMUST00000158833 313 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Gm25162-201ENSMUST00000158906 159 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Gm24390-201ENSMUST00000179578 62 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Mir6355-201ENSMUST00000183687 106 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.63□□□□□ -2.31
Sdc4O35988 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Sdc4O35988 Gm34015-201ENSMUST00000194908 451 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Gm23370-201ENSMUST00000199545 130 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Gm44870-201ENSMUST00000207291 357 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Sdc4O35988 Snord1a-201ENSMUST00000083160 74 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Gm22972-201ENSMUST00000083297 131 ntBASIC0.63□□□□□ -2.31
Sdc4O35988 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Sdc4O35988 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm12449-201ENSMUST00000117572 234 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm13577-201ENSMUST00000121365 205 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm12779-201ENSMUST00000121496 143 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 Gm13356-201ENSMUST00000121678 335 ntBASIC0.62□□□□□ -2.31
Sdc4O35988 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.62□□□□□ -2.31
Sdc4O35988 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.62□□□□□ -2.31
Sdc4O35988 Gm23000-201ENSMUST00000157083 139 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms