Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm25078-201ENSMUST00000082530 107 ntBASIC2.38□□□□□ -2.03
Clk3O35492 Gm22622-201ENSMUST00000082870 129 ntBASIC2.38□□□□□ -2.03
Clk3O35492 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Clk3O35492 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Clk3O35492 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Mir682-201ENSMUST00000102281 96 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Mir344c-201ENSMUST00000103919 92 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm25111-201ENSMUST00000116686 147 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm13885-201ENSMUST00000117569 187 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm11598-201ENSMUST00000119257 357 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm14782-201ENSMUST00000120151 195 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm13992-201ENSMUST00000120558 156 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.37□□□□□ -2.03
Clk3O35492 Gm24691-201ENSMUST00000157762 140 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm21827-201ENSMUST00000178247 423 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm23003-201ENSMUST00000179948 107 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm27220-201ENSMUST00000183453 262 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.37□□□□□ -2.03
Clk3O35492 Trbv6-201ENSMUST00000193743 276 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Clk3O35492 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Gm25796-201ENSMUST00000082645 163 ntBASIC2.37□□□□□ -2.03
Clk3O35492 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Clk3O35492 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Clk3O35492 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Clk3O35492 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Mir1b-201ENSMUST00000117012 122 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm13711-201ENSMUST00000119708 453 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm25805-201ENSMUST00000122788 108 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm25059-201ENSMUST00000157367 117 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm25888-201ENSMUST00000157778 302 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm25488-201ENSMUST00000158728 118 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm27753-201ENSMUST00000184742 203 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm28058-201ENSMUST00000186421 264 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.36□□□□□ -2.03
Clk3O35492 Gm29167-201ENSMUST00000190024 377 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm38019-201ENSMUST00000195133 380 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Mir3970-201ENSMUST00000199287 90 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.36□□□□□ -2.03
Clk3O35492 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.36□□□□□ -2.03
Clk3O35492 mt-Td-201ENSMUST00000082404 70 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm25589-201ENSMUST00000082502 166 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Gm24316-201ENSMUST00000083041 107 ntBASIC2.36□□□□□ -2.03
Clk3O35492 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Clk3O35492 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Clk3O35492 Gm15526-201ENSMUST00000112504 204 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm3788-201ENSMUST00000119949 136 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm6574-201ENSMUST00000120037 362 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm13967-201ENSMUST00000120404 380 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm24629-201ENSMUST00000122762 89 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.35□□□□□ -2.03
Clk3O35492 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Clk3O35492 Gm24480-201ENSMUST00000157442 103 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm24847-201ENSMUST00000158032 108 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm25933-201ENSMUST00000178943 108 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm27532-201ENSMUST00000183726 113 ntBASIC2.35□□□□□ -2.03
Clk3O35492 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Clk3O35492 Gm37763-201ENSMUST00000193445 120 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Mir3535-201ENSMUST00000197651 147 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Gm45879-201ENSMUST00000212521 392 ntBASIC2.35□□□□□ -2.03
Clk3O35492 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.35□□□□□ -2.03
Clk3O35492 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Clk3O35492 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm25407-201ENSMUST00000104102 134 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm26249-201ENSMUST00000116708 118 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm12351-201ENSMUST00000118727 292 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm15213-201ENSMUST00000122098 216 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm25270-201ENSMUST00000122606 138 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm24858-201ENSMUST00000158058 323 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm24771-201ENSMUST00000158508 137 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm28627-201ENSMUST00000186141 453 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm43722-201ENSMUST00000196054 124 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm44182-201ENSMUST00000204052 115 ntBASIC2.34□□□□□ -2.03
Clk3O35492 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.34□□□□□ -2.03
Clk3O35492 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Clk3O35492 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.34□□□□□ -2.03
Clk3O35492 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.33□□□□□ -2.04
Clk3O35492 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Clk3O35492 Gm11862-201ENSMUST00000119678 659 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Clk3O35492 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Clk3O35492 Gm43264-201ENSMUST00000202284 325 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Gm45313-201ENSMUST00000210584 178 ntBASIC2.33□□□□□ -2.04
Clk3O35492 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.33□□□□□ -2.04
Clk3O35492 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.33□□□□□ -2.04
Clk3O35492 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.33□□□□□ -2.04
Clk3O35492 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Clk3O35492 Gm26126-201ENSMUST00000083188 164 ntBASIC2.33□□□□□ -2.04
Clk3O35492 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.33□□□□□ -2.04
Clk3O35492 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 152.4 ms