Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm25625-201ENSMUST00000157221 96 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Mir669n-201ENSMUST00000158636 54 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm24348-201ENSMUST00000158710 130 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm24308-201ENSMUST00000177773 114 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm25457-201ENSMUST00000179509 107 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm28257-201ENSMUST00000185244 463 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm28744-201ENSMUST00000189939 340 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm29167-201ENSMUST00000190024 377 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Mir7227-201ENSMUST00000200408 59 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm44024-201ENSMUST00000203008 476 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm23462-201ENSMUST00000083264 104 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm25793-201ENSMUST00000083287 107 ntBASIC2.57□□□□□ -2
Ccdc188F6WEU2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm25094-201ENSMUST00000103992 131 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm12647-201ENSMUST00000118977 265 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm23214-201ENSMUST00000122716 157 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm24892-201ENSMUST00000122747 104 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm26105-201ENSMUST00000157253 190 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm22556-201ENSMUST00000157803 100 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm22447-201ENSMUST00000158155 92 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.56□□□□□ -2
Ccdc188F6WEU2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm27527-201ENSMUST00000183903 99 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.56□□□□□ -2
Ccdc188F6WEU2 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Mir7661-201ENSMUST00000197023 61 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc188F6WEU2 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ccdc188F6WEU2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.56□□□□□ -2
Ccdc188F6WEU2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm14894-201ENSMUST00000117170 270 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm13432-201ENSMUST00000118861 241 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm22101-201ENSMUST00000157928 103 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm24394-201ENSMUST00000158141 123 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm25020-201ENSMUST00000178071 107 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm24799-201ENSMUST00000178431 79 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm37449-201ENSMUST00000193016 270 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm18658-201ENSMUST00000195558 270 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm43587-201ENSMUST00000199590 204 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm2829-201ENSMUST00000213121 499 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Ccdc188F6WEU2 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm19118-201ENSMUST00000222554 98 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Snora23-201ENSMUST00000082517 184 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.55□□□□□ -2
Ccdc188F6WEU2 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc188F6WEU2 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc188F6WEU2 BC022960-201ENSMUST00000119987 1815 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Mir872-201ENSMUST00000104728 81 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm23579-201ENSMUST00000158528 103 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm24225-201ENSMUST00000158825 98 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm24638-201ENSMUST00000179807 132 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Mir6399-201ENSMUST00000184050 84 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm29597-201ENSMUST00000188035 308 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm29657-201ENSMUST00000189807 342 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm29665-201ENSMUST00000191457 528 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm36891-201ENSMUST00000191995 655 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm37889-201ENSMUST00000194174 251 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm43250-201ENSMUST00000196536 273 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm43978-201ENSMUST00000203491 451 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm44429-201ENSMUST00000203542 186 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm43914-201ENSMUST00000203592 594 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm23625-201ENSMUST00000082457 100 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.54□□□□□ -2
Ccdc188F6WEU2 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc188F6WEU2 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Mir6405-201ENSMUST00000184584 124 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Gm29147-201ENSMUST00000186846 315 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Gm29227-201ENSMUST00000187139 315 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Gm29034-201ENSMUST00000188099 315 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Gm28160-201ENSMUST00000191229 315 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Gm37129-201ENSMUST00000195791 315 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Mir32-201ENSMUST00000083610 70 ntBASIC2.53□□□□□ -2
Ccdc188F6WEU2 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ccdc188F6WEU2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc188F6WEU2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccdc188F6WEU2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Ccdc188F6WEU2 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Ccdc188F6WEU2 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Ccdc188F6WEU2 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc188F6WEU2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.52□□□□□ -2.01
Ccdc188F6WEU2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.52□□□□□ -2.01
Ccdc188F6WEU2 Gm26473-201ENSMUST00000116763 127 ntBASIC2.52□□□□□ -2.01
Ccdc188F6WEU2 Gm22713-201ENSMUST00000116895 130 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms