Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Pcdhb9E9Q5G2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.4□□□□□ -2.03
Pcdhb9E9Q5G2 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.4□□□□□ -2.03
Pcdhb9E9Q5G2 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm12646-201ENSMUST00000119144 238 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm14770-201ENSMUST00000122197 312 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm22598-201ENSMUST00000157600 127 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm25460-201ENSMUST00000157954 127 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24618-201ENSMUST00000177718 94 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23953-201ENSMUST00000178214 94 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm26332-201ENSMUST00000179813 94 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm22863-201ENSMUST00000180265 94 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm28288-201ENSMUST00000191019 214 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm37162-201ENSMUST00000191708 551 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23378-201ENSMUST00000082942 107 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Mir423-201ENSMUST00000083584 109 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24764-201ENSMUST00000083686 199 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm25651-201ENSMUST00000083782 119 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23040-201ENSMUST00000083869 163 ntBASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Pcdhb9E9Q5G2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm15010-201ENSMUST00000117153 407 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm11935-201ENSMUST00000118608 399 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm25269-201ENSMUST00000122601 104 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23214-201ENSMUST00000122716 157 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm22727-201ENSMUST00000158090 116 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm37338-201ENSMUST00000191986 127 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm37889-201ENSMUST00000194174 251 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Trbv18-201ENSMUST00000194256 294 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm22685-201ENSMUST00000082848 106 ntBASIC2.38□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24590-201ENSMUST00000116699 119 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Gm11606-201ENSMUST00000120706 617 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Gm22101-201ENSMUST00000157928 103 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Mir6355-201ENSMUST00000183687 106 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Gm45207-201ENSMUST00000207469 145 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Gm25796-201ENSMUST00000082645 163 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24460-201ENSMUST00000082731 106 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23731-201ENSMUST00000083749 107 ntBASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Pcdhb9E9Q5G2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23951-201ENSMUST00000104029 132 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm12304-201ENSMUST00000120312 385 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm14298-201ENSMUST00000139032 237 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm2830-201ENSMUST00000140330 385 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm16356-201ENSMUST00000143300 169 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24478-201ENSMUST00000157439 158 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm22803-201ENSMUST00000158049 283 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Mir6406-201ENSMUST00000183592 120 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Gm44960-201ENSMUST00000207403 141 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Pcdhb9E9Q5G2 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm12550-201ENSMUST00000118478 329 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm22114-201ENSMUST00000177756 107 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm28627-201ENSMUST00000186141 453 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm28995-201ENSMUST00000186625 261 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Mir7661-201ENSMUST00000197023 61 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23406-201ENSMUST00000082537 122 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm26329-201ENSMUST00000093723 110 ntBASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Pcdhb9E9Q5G2 Gm23950-201ENSMUST00000104026 129 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24892-201ENSMUST00000122747 104 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24726-201ENSMUST00000158232 121 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm25488-201ENSMUST00000158728 118 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm24308-201ENSMUST00000177773 114 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm29512-201ENSMUST00000185544 315 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm28110-201ENSMUST00000185782 315 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm29057-201ENSMUST00000186468 315 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm29661-201ENSMUST00000186781 315 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm28737-201ENSMUST00000186808 315 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm29118-201ENSMUST00000186908 315 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm28433-201ENSMUST00000187085 315 ntBASIC2.34□□□□□ -2.03
Pcdhb9E9Q5G2 Gm28759-201ENSMUST00000187621 315 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms