Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm29657-201ENSMUST00000189807 342 ntBASIC2.08□□□□□ -2.08
Shank1D3YZU1 Gm37713-201ENSMUST00000191746 198 ntBASIC2.08□□□□□ -2.08
Shank1D3YZU1 Gm36946-201ENSMUST00000192706 435 ntBASIC2.08□□□□□ -2.08
Shank1D3YZU1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.08□□□□□ -2.08
Shank1D3YZU1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.08□□□□□ -2.08
Shank1D3YZU1 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.08□□□□□ -2.08
Shank1D3YZU1 Gm25421-201ENSMUST00000104218 164 ntBASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm12042-201ENSMUST00000120479 301 ntBASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm12155-201ENSMUST00000121267 160 ntBASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm26256-201ENSMUST00000122499 186 ntBASIC2.07□□□□□ -2.08
Shank1D3YZU1 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm37763-201ENSMUST00000193445 120 ntBASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm42739-201ENSMUST00000200687 226 ntBASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm44977-201ENSMUST00000205283 420 ntBASIC2.07□□□□□ -2.08
Shank1D3YZU1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Shank1D3YZU1 Gm13432-201ENSMUST00000118861 241 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm11414-201ENSMUST00000121795 263 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm23716-201ENSMUST00000157348 144 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm7592-201ENSMUST00000160674 627 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm24308-201ENSMUST00000177773 114 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm37579-201ENSMUST00000194291 142 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Shank1D3YZU1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm12213-201ENSMUST00000119924 353 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm14069-201ENSMUST00000120815 229 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm14770-201ENSMUST00000122197 312 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm26277-201ENSMUST00000157097 152 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm24846-201ENSMUST00000158033 108 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm26426-201ENSMUST00000177866 123 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm25450-201ENSMUST00000179144 107 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm26060-201ENSMUST00000180094 123 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm28849-201ENSMUST00000188127 174 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm28330-201ENSMUST00000190353 171 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm37923-201ENSMUST00000191624 161 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm45687-201ENSMUST00000209454 155 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.06□□□□□ -2.08
Shank1D3YZU1 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Shank1D3YZU1 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm15183-201ENSMUST00000118933 348 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm22215-201ENSMUST00000157558 96 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm25643-201ENSMUST00000158874 103 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm23476-201ENSMUST00000158881 274 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm27443-201ENSMUST00000184660 98 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm27747-201ENSMUST00000184707 85 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.05□□□□□ -2.08
Shank1D3YZU1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.05□□□□□ -2.08
Shank1D3YZU1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Shank1D3YZU1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Shank1D3YZU1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm26327-201ENSMUST00000093724 111 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm22270-201ENSMUST00000104034 132 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm25875-201ENSMUST00000104323 107 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm23202-201ENSMUST00000104376 129 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm15215-201ENSMUST00000117773 489 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm12513-201ENSMUST00000118617 352 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm11356-201ENSMUST00000118974 192 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm25625-201ENSMUST00000157221 96 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm22839-201ENSMUST00000158436 304 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm23247-201ENSMUST00000083373 107 ntBASIC2.05□□□□□ -2.08
Shank1D3YZU1 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Shank1D3YZU1 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm24126-201ENSMUST00000104111 106 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm14073-201ENSMUST00000117344 381 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Trav20-201ENSMUST00000142754 347 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm23982-201ENSMUST00000157141 106 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm25454-201ENSMUST00000157947 315 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm20058-201ENSMUST00000186939 284 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm43680-201ENSMUST00000199466 340 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm44425-201ENSMUST00000203739 429 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm24522-201ENSMUST00000083964 108 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.04□□□□□ -2.08
Shank1D3YZU1 Mir875-201ENSMUST00000104698 78 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm22027-201ENSMUST00000122737 127 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm27723-201ENSMUST00000157398 63 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm8292-201ENSMUST00000162574 396 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Gm27582-201ENSMUST00000184084 126 ntBASIC2.03□□□□□ -2.08
Shank1D3YZU1 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms