Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm24014-201ENSMUST00000157728 157 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm23044-201ENSMUST00000157891 100 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm24054-201ENSMUST00000158619 105 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm23182-201ENSMUST00000158688 135 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm25020-201ENSMUST00000178071 107 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm37281-201ENSMUST00000192412 439 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm23518-201ENSMUST00000082835 153 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm26265-201ENSMUST00000083277 135 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm23247-201ENSMUST00000083373 107 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm23320-201ENSMUST00000104462 127 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm22193-201ENSMUST00000116868 76 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm12412-201ENSMUST00000121867 328 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm15466-201ENSMUST00000122299 333 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm24480-201ENSMUST00000157442 103 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Mir1934-201ENSMUST00000158127 83 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm25012-201ENSMUST00000158396 164 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm25835-201ENSMUST00000158917 144 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.35□□□□□ -1.87
Ccdc9bA3KGF9 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm22373-201ENSMUST00000104584 89 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm14973-201ENSMUST00000117248 255 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm16533-201ENSMUST00000140035 228 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm24138-201ENSMUST00000157572 114 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Mir6917-201ENSMUST00000184111 61 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm28591-201ENSMUST00000185259 183 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm28155-201ENSMUST00000191066 151 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm37081-201ENSMUST00000192034 196 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm44355-201ENSMUST00000200417 104 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Gm44459-201ENSMUST00000203926 160 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Mir488-201ENSMUST00000093595 109 ntBASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc9bA3KGF9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ccdc9bA3KGF9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ccdc9bA3KGF9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Gm22586-201ENSMUST00000157507 122 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Gm37290-201ENSMUST00000195775 339 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Mir1291-201ENSMUST00000199842 117 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Snora34-201ENSMUST00000083402 138 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc9bA3KGF9 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Mir669b-201ENSMUST00000102172 97 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm23655-201ENSMUST00000122627 105 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm24627-201ENSMUST00000122764 138 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm23895-201ENSMUST00000158108 160 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm23194-201ENSMUST00000158813 105 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Mir7081-201ENSMUST00000184490 75 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm44887-201ENSMUST00000208980 178 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm21007-201ENSMUST00000221024 326 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm26493-201ENSMUST00000083155 136 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm24616-201ENSMUST00000083274 139 ntBASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc9bA3KGF9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms