Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm4732-201ENSMUST00000118778 473 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm14362-201ENSMUST00000121679 273 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm14364-201ENSMUST00000129209 267 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm15254-201ENSMUST00000149567 273 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23390-201ENSMUST00000157393 106 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23106-201ENSMUST00000157554 101 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23078-201ENSMUST00000157848 148 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm23641-201ENSMUST00000157857 101 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm25166-201ENSMUST00000158909 111 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm28412-201ENSMUST00000187243 177 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm42570-201ENSMUST00000195937 292 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm44308-201ENSMUST00000197080 99 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm43914-201ENSMUST00000203592 594 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Gm46136-201ENSMUST00000214730 565 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.35□□□□□ -2.35
Trav9-4A0A0B4J1K2 Mir687-201ENSMUST00000102166 89 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm14417-201ENSMUST00000120036 1074 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm16053-201ENSMUST00000120511 188 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm22477-201ENSMUST00000122569 316 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm25294-201ENSMUST00000122791 104 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23958-201ENSMUST00000157207 105 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir3061-201ENSMUST00000175129 91 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24390-201ENSMUST00000179578 62 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm44458-201ENSMUST00000196594 143 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm43602-201ENSMUST00000196772 300 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm43898-201ENSMUST00000204456 424 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm18703-201ENSMUST00000215318 333 ntBASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm25876-201ENSMUST00000104329 119 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm26143-201ENSMUST00000104480 108 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm12806-201ENSMUST00000119384 268 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm13396-201ENSMUST00000120617 271 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23184-201ENSMUST00000122594 131 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm22221-201ENSMUST00000157362 103 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23589-201ENSMUST00000157660 105 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24401-201ENSMUST00000157868 91 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23068-201ENSMUST00000158239 293 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23114-201ENSMUST00000158478 117 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm25361-201ENSMUST00000179358 76 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir6985-201ENSMUST00000184641 61 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm27942-201ENSMUST00000184669 101 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm28283-201ENSMUST00000185509 178 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm28299-201ENSMUST00000189908 339 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm29490-201ENSMUST00000190923 342 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm37727-201ENSMUST00000191637 819 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm37089-201ENSMUST00000195616 129 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm43529-201ENSMUST00000199178 412 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm44465-201ENSMUST00000199536 114 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm43004-201ENSMUST00000201872 703 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC168880.1-201ENSMUST00000225113 707 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm22810-201ENSMUST00000082741 158 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24977-201ENSMUST00000083106 163 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Snord33-201ENSMUST00000083694 84 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir362-201ENSMUST00000093592 65 ntBASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Trav9-4A0A0B4J1K2 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm2020-201ENSMUST00000145242 579 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23435-201ENSMUST00000157183 156 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23331-201ENSMUST00000157423 108 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24784-201ENSMUST00000157640 62 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23008-201ENSMUST00000158946 80 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm26285-201ENSMUST00000177923 107 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24464-201ENSMUST00000179697 107 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm43432-201ENSMUST00000196352 121 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm44491-201ENSMUST00000196794 96 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm18971-201ENSMUST00000197240 374 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23622-201ENSMUST00000082460 107 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm22972-201ENSMUST00000083297 131 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.32□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23321-201ENSMUST00000104465 126 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm12102-201ENSMUST00000118251 604 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm2768-201ENSMUST00000121062 250 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm2962-201ENSMUST00000159266 336 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm22403-201ENSMUST00000174919 84 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir5104-201ENSMUST00000175319 94 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm25874-201ENSMUST00000178030 79 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm37923-201ENSMUST00000191624 161 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm38149-201ENSMUST00000191943 339 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm36956-201ENSMUST00000193830 214 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm44254-201ENSMUST00000204184 322 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms