Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm8151-201ENSMUST00000184817 871 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm18296-201ENSMUST00000192475 783 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm37658-201ENSMUST00000192672 315 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm45456-201ENSMUST00000210841 243 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 AC134334.1-201ENSMUST00000214277 255 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm25859-201ENSMUST00000083710 91 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Gm26424-201ENSMUST00000122530 104 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Gm22227-201ENSMUST00000157356 259 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23221-201ENSMUST00000158118 93 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24901-201ENSMUST00000158125 110 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Gm22308-201ENSMUST00000177609 107 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Mir7675-201ENSMUST00000184262 58 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Gm19901-201ENSMUST00000192191 495 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Gm26066-201ENSMUST00000083385 109 ntBASIC0.99□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm6829-201ENSMUST00000119858 360 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24632-201ENSMUST00000122770 323 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm8121-201ENSMUST00000153583 499 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23558-201ENSMUST00000157823 80 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24726-201ENSMUST00000158232 121 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm22944-201ENSMUST00000158662 133 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24668-201ENSMUST00000158935 104 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24366-201ENSMUST00000175383 86 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Mir7068-201ENSMUST00000183439 74 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Mir7226-201ENSMUST00000184953 60 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Trbv22-201ENSMUST00000191697 291 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm44491-201ENSMUST00000196794 96 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm43723-201ENSMUST00000196886 189 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm35736-201ENSMUST00000203681 313 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 AC192616.1-201ENSMUST00000221922 132 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Gm26493-201ENSMUST00000083155 136 ntBASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Trav11A0A0B4J1J9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm15214-201ENSMUST00000122155 470 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Mir669n-201ENSMUST00000158636 54 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm25491-201ENSMUST00000158733 308 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm26435-201ENSMUST00000179026 107 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm25253-201ENSMUST00000179958 107 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm27493-201ENSMUST00000184128 78 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm27421-201ENSMUST00000184729 167 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Mir148b-201ENSMUST00000083626 97 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Snord7-201ENSMUST00000083781 97 ntBASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.97□□□□□ -2.25
Trav11A0A0B4J1J9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC0.96□□□□□ -2.25
Trav11A0A0B4J1J9 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm22761-201ENSMUST00000102278 96 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Mir758-201ENSMUST00000103260 81 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm23411-201ENSMUST00000157988 62 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm22803-201ENSMUST00000158049 283 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm25163-201ENSMUST00000158905 104 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28110-201ENSMUST00000185782 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm29057-201ENSMUST00000186468 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28737-201ENSMUST00000186808 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm29147-201ENSMUST00000186846 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm29118-201ENSMUST00000186908 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28409-201ENSMUST00000187064 103 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28433-201ENSMUST00000187085 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm29227-201ENSMUST00000187139 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28759-201ENSMUST00000187621 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28831-201ENSMUST00000187739 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28200-201ENSMUST00000187778 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm29034-201ENSMUST00000188099 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28752-201ENSMUST00000188340 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm29378-201ENSMUST00000188723 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28569-201ENSMUST00000188748 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28120-201ENSMUST00000188812 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28369-201ENSMUST00000188993 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28537-201ENSMUST00000189026 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28909-201ENSMUST00000189406 315 ntBASIC0.96□□□□□ -2.26
Trav11A0A0B4J1J9 Gm28861-201ENSMUST00000189681 315 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms