Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm44446-201ENSMUST00000204864 255 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24311-201ENSMUST00000082570 104 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Mir10a-201ENSMUST00000083585 110 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Mir452-201ENSMUST00000093629 85 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.34□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm26082-201ENSMUST00000104070 127 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm22193-201ENSMUST00000116868 76 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm3788-201ENSMUST00000119949 136 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm14599-201ENSMUST00000120469 474 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm25162-201ENSMUST00000158906 159 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Snora24-201ENSMUST00000174989 130 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Mir1954-201ENSMUST00000175595 86 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm18971-201ENSMUST00000197240 374 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm5010-201ENSMUST00000213131 260 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm40810-201ENSMUST00000219149 253 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24152-201ENSMUST00000082764 163 ntBASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Trbv16A0A0B4J1H3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm22668-201ENSMUST00000158716 260 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm25491-201ENSMUST00000158733 308 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm28862-201ENSMUST00000188246 163 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm22577-201ENSMUST00000083731 109 ntBASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm25088-201ENSMUST00000101803 79 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm25269-201ENSMUST00000122601 104 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24840-201ENSMUST00000122603 147 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm22228-201ENSMUST00000157364 101 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm22290-201ENSMUST00000177655 107 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm22583-201ENSMUST00000178031 107 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm37709-201ENSMUST00000195074 600 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm34073-201ENSMUST00000195736 212 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm44976-201ENSMUST00000205543 261 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.31□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm22796-201ENSMUST00000157234 106 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Mir7062-201ENSMUST00000185038 66 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm37869-201ENSMUST00000193385 595 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm44358-201ENSMUST00000196301 98 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm44830-201ENSMUST00000207667 584 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm19855-201ENSMUST00000210145 249 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.3□□□□□ -2.36
Trbv16A0A0B4J1H3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24168-201ENSMUST00000178825 107 ntBASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Mir7052-201ENSMUST00000184821 65 ntBASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm45375-201ENSMUST00000210338 280 ntBASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24624-201ENSMUST00000082617 164 ntBASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.29□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Mir293-201ENSMUST00000104841 80 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm23777-201ENSMUST00000158994 259 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm7925-201ENSMUST00000166690 401 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm26914-201ENSMUST00000182262 223 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm28435-201ENSMUST00000185496 108 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm44396-201ENSMUST00000199843 114 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 Gm23453-201ENSMUST00000083326 106 ntBASIC0.28□□□□□ -2.36
Trbv16A0A0B4J1H3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.28□□□□□ -2.37
Trbv16A0A0B4J1H3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.27□□□□□ -2.37
Trbv16A0A0B4J1H3 Gm12102-201ENSMUST00000118251 604 ntBASIC0.27□□□□□ -2.37
Trbv16A0A0B4J1H3 Gm23118-201ENSMUST00000122657 187 ntBASIC0.27□□□□□ -2.37
Trbv16A0A0B4J1H3 Gm2962-201ENSMUST00000159266 336 ntBASIC0.27□□□□□ -2.37
Trbv16A0A0B4J1H3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trbv16A0A0B4J1H3 Gm17100-201ENSMUST00000168963 272 ntBASIC0.27□□□□□ -2.37
Trbv16A0A0B4J1H3 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms