Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm3788-201ENSMUST00000119949 136 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25543-201ENSMUST00000122678 312 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25054-201ENSMUST00000157370 97 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22082-201ENSMUST00000157587 161 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22315-201ENSMUST00000158010 143 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24177-201ENSMUST00000158927 131 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25035-201ENSMUST00000175414 77 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25730-201ENSMUST00000178753 165 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22510-201ENSMUST00000179304 79 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm26336-201ENSMUST00000179449 79 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm26390-201ENSMUST00000179628 79 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Mir6388-201ENSMUST00000184417 75 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm18546-201ENSMUST00000197245 676 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm18617-201ENSMUST00000222311 259 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Mir148b-201ENSMUST00000083626 97 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.18□□□□□ -2.22
Trbv1A0A0B4J1G7 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm12433-201ENSMUST00000119659 255 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm15861-201ENSMUST00000120979 339 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25392-201ENSMUST00000157335 297 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm23120-201ENSMUST00000157654 287 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm26181-201ENSMUST00000157687 106 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24551-201ENSMUST00000158645 92 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm16038-201ENSMUST00000159317 193 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm20477-201ENSMUST00000174028 280 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm20438-201ENSMUST00000174441 329 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm23090-201ENSMUST00000177331 78 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm28453-203ENSMUST00000187041 189 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm19901-201ENSMUST00000192191 495 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm45403-201ENSMUST00000209453 276 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25651-201ENSMUST00000083782 119 ntBASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.17□□□□□ -2.22
Trbv1A0A0B4J1G7 Mir223-201ENSMUST00000102112 110 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22761-201ENSMUST00000102278 96 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm23951-201ENSMUST00000104029 132 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22193-201ENSMUST00000116868 76 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm23048-201ENSMUST00000157237 129 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm26150-201ENSMUST00000157426 151 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25333-201ENSMUST00000158035 246 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm23059-201ENSMUST00000158978 107 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm17148-201ENSMUST00000164702 249 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24085-201ENSMUST00000175172 116 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm21754-201ENSMUST00000177550 479 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm29603-201ENSMUST00000186792 334 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm37054-201ENSMUST00000193481 543 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm46312-201ENSMUST00000220961 420 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm20102-201ENSMUST00000222445 220 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Ear14-201ENSMUST00000049559 468 ntBASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Trbv1A0A0B4J1G7 Mir374b-201ENSMUST00000102314 95 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm26474-201ENSMUST00000116762 122 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm12351-201ENSMUST00000118727 292 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm14269-201ENSMUST00000120455 306 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm11522-201ENSMUST00000120533 176 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm24394-201ENSMUST00000158141 123 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm23016-201ENSMUST00000158431 62 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm25314-201ENSMUST00000178810 79 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm26652-202ENSMUST00000181672 475 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Mir7026-201ENSMUST00000184384 67 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Mir7050-201ENSMUST00000184636 60 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm21064-202ENSMUST00000190583 278 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm37128-201ENSMUST00000192599 232 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm45116-201ENSMUST00000207392 275 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm24615-201ENSMUST00000083268 113 ntBASIC1.15□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm26314-201ENSMUST00000083891 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms