Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm25121-201ENSMUST00000179846 79 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm22263-201ENSMUST00000180060 104 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm37338-201ENSMUST00000191986 127 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Mir3970-201ENSMUST00000199287 90 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm45616-201ENSMUST00000211711 319 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm9318-201ENSMUST00000222444 438 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm25896-201ENSMUST00000083713 136 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm23941-201ENSMUST00000101953 107 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm22752-201ENSMUST00000102083 109 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Mir344c-201ENSMUST00000103919 92 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm24590-201ENSMUST00000116699 119 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm14748-201ENSMUST00000119819 411 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm16510-201ENSMUST00000153501 249 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm25910-201ENSMUST00000157620 140 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm22483-201ENSMUST00000157986 274 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm25066-201ENSMUST00000158145 123 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm24304-201ENSMUST00000177635 107 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm29490-201ENSMUST00000190923 342 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm44393-201ENSMUST00000197418 138 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm44010-201ENSMUST00000204432 331 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Mir93-201ENSMUST00000083593 88 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm24698-201ENSMUST00000083883 130 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.03□□□□□ -2.08
H2afb1S4R1E0 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm24049-201ENSMUST00000102409 100 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm24982-201ENSMUST00000104456 132 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm15002-201ENSMUST00000118406 452 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm12550-201ENSMUST00000118478 329 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm12721-201ENSMUST00000120621 268 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm5396-201ENSMUST00000121222 532 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm25625-201ENSMUST00000157221 96 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm24308-201ENSMUST00000177773 114 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm25020-201ENSMUST00000178071 107 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm28257-201ENSMUST00000185244 463 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm43978-201ENSMUST00000203491 451 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm44794-201ENSMUST00000206550 411 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.02□□□□□ -2.09
H2afb1S4R1E0 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm25930-201ENSMUST00000082785 107 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Mir32-201ENSMUST00000083610 70 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gm26329-201ENSMUST00000093723 110 ntBASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
H2afb1S4R1E0 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm23747-201ENSMUST00000104228 131 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm12647-201ENSMUST00000118977 265 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm13711-201ENSMUST00000119708 453 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm14298-201ENSMUST00000139032 237 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm16356-201ENSMUST00000143300 169 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm22814-201ENSMUST00000157452 104 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm22316-201ENSMUST00000158012 216 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm24922-201ENSMUST00000158511 102 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm23579-201ENSMUST00000158528 103 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm29147-201ENSMUST00000186846 315 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm29227-201ENSMUST00000187139 315 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm29034-201ENSMUST00000188099 315 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm20923-201ENSMUST00000190009 319 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm21088-201ENSMUST00000190875 316 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm28160-201ENSMUST00000191229 315 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm37129-201ENSMUST00000195791 315 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm3724-201ENSMUST00000197957 349 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Mir7227-201ENSMUST00000200408 59 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.01□□□□□ -2.09
H2afb1S4R1E0 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm24937-201ENSMUST00000122597 134 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm25543-201ENSMUST00000122678 312 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm24627-201ENSMUST00000122764 138 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm24630-201ENSMUST00000122768 106 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm25808-201ENSMUST00000122784 284 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm22527-201ENSMUST00000158816 106 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm25368-201ENSMUST00000158847 131 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm23474-201ENSMUST00000158884 75 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm7592-201ENSMUST00000160674 627 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Mir3076-201ENSMUST00000175415 60 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm27532-201ENSMUST00000183726 113 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2□□□□□ -2.09
H2afb1S4R1E0 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2□□□□□ -2.09
H2afb1S4R1E0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm2829-201ENSMUST00000213121 499 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2□□□□□ -2.09
H2afb1S4R1E0 AC151833.1-201ENSMUST00000227752 574 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms