Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44337-201ENSMUST00000196553 114 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm43723-201ENSMUST00000196886 189 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Snord43-201ENSMUST00000199549 108 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm23462-201ENSMUST00000083264 104 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Snora33-201ENSMUST00000093556 129 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm15030-201ENSMUST00000119804 484 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm11786-201ENSMUST00000120799 155 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm14709-201ENSMUST00000121225 304 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm24478-201ENSMUST00000157439 158 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Mir28b-201ENSMUST00000175399 80 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Mir6406-201ENSMUST00000183592 120 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm27588-201ENSMUST00000185096 263 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm43512-201ENSMUST00000198495 176 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.77□□□□□ -2.13
Trim3Q9R1R2 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Rny3-201ENSMUST00000083011 102 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm26066-201ENSMUST00000083385 109 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Mir151-201ENSMUST00000083678 68 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm26164-201ENSMUST00000083793 104 ntBASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.77□□□□□ -2.13
Trim3Q9R1R2 Gm14296-202ENSMUST00000108931 750 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm27926-201ENSMUST00000157180 66 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm24858-201ENSMUST00000158058 323 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm7592-201ENSMUST00000160674 627 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm25956-201ENSMUST00000175115 217 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm24085-201ENSMUST00000175172 116 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm24810-201ENSMUST00000175317 70 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm23191-201ENSMUST00000179147 107 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm36953-201ENSMUST00000195295 268 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm43583-201ENSMUST00000199235 303 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm43914-201ENSMUST00000203592 594 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm44564-201ENSMUST00000207985 180 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm18617-201ENSMUST00000222311 259 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.76□□□□□ -2.13
Trim3Q9R1R2 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Gm15010-201ENSMUST00000117153 407 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Gm27878-201ENSMUST00000184000 106 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Gm27544-201ENSMUST00000185069 155 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Gm45150-201ENSMUST00000206051 467 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Gm44666-201ENSMUST00000208544 391 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
Trim3Q9R1R2 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Mir758-201ENSMUST00000103260 81 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm26396-201ENSMUST00000104093 132 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm25059-201ENSMUST00000157367 117 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Mir1949-201ENSMUST00000157434 141 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm22843-201ENSMUST00000157710 134 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Mir669n-201ENSMUST00000158636 54 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm9892-201ENSMUST00000182415 992 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm32175-201ENSMUST00000193641 346 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm37845-201ENSMUST00000194977 355 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm25813-201ENSMUST00000082748 191 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm25896-201ENSMUST00000083713 136 ntBASIC1.74□□□□□ -2.13
Trim3Q9R1R2 Gm23109-201ENSMUST00000116867 126 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Gm22316-201ENSMUST00000158012 216 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Gm3027-201ENSMUST00000167579 451 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Mir7026-201ENSMUST00000184384 67 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Gm29005-201ENSMUST00000186773 320 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Mir7021-201ENSMUST00000197026 63 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trim3Q9R1R2 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Gm25651-201ENSMUST00000083782 119 ntBASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trim3Q9R1R2 Mir701-201ENSMUST00000102208 109 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm23951-201ENSMUST00000104029 132 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 236.4 ms