Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm28831-201ENSMUST00000187739 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm29034-201ENSMUST00000188099 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28752-201ENSMUST00000188340 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28474-201ENSMUST00000188501 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28569-201ENSMUST00000188748 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28120-201ENSMUST00000188812 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28369-201ENSMUST00000188993 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28537-201ENSMUST00000189026 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28861-201ENSMUST00000189681 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28717-201ENSMUST00000189950 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm29180-201ENSMUST00000190003 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm29631-201ENSMUST00000191065 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm28160-201ENSMUST00000191229 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm29469-201ENSMUST00000191448 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm37658-201ENSMUST00000192672 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm37129-201ENSMUST00000195791 315 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm42925-201ENSMUST00000197359 285 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm17911-201ENSMUST00000210806 877 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm22061-201ENSMUST00000082557 107 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.16□□□□□ -2.43
Scn11aQ9R053 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Gm44708-201ENSMUST00000205580 2237 ntBASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Gm24079-201ENSMUST00000104352 132 ntBASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Gm25663-201ENSMUST00000157698 135 ntBASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.17□□□□□ -2.44
Scn11aQ9R053 Gm13454-201ENSMUST00000118166 483 ntBASIC-0.18□□□□□ -2.44
Scn11aQ9R053 Gm11384-201ENSMUST00000121376 303 ntBASIC-0.18□□□□□ -2.44
Scn11aQ9R053 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
Scn11aQ9R053 Gm27289-201ENSMUST00000183341 82 ntBASIC-0.18□□□□□ -2.44
Scn11aQ9R053 Gm23370-202ENSMUST00000197008 129 ntBASIC-0.18□□□□□ -2.44
Scn11aQ9R053 Gm42475-201ENSMUST00000201212 295 ntBASIC-0.18□□□□□ -2.44
Scn11aQ9R053 AC120540.1-201ENSMUST00000221879 324 ntBASIC-0.18□□□□□ -2.44
Scn11aQ9R053 Mir19b-2-201ENSMUST00000083539 84 ntBASIC-0.18□□□□□ -2.44
Scn11aQ9R053 Gm25914-201ENSMUST00000157618 153 ntBASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Gm37193-201ENSMUST00000193087 513 ntBASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Gm45701-201ENSMUST00000212049 235 ntBASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Gm13885-201ENSMUST00000117569 187 ntBASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Gm28409-201ENSMUST00000187064 103 ntBASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Gm44137-201ENSMUST00000203670 367 ntBASIC-0.19□□□□□ -2.44
Scn11aQ9R053 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm7350-201ENSMUST00000120964 636 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm11849-201ENSMUST00000121293 261 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 n-R5s192-201ENSMUST00000122577 119 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm23854-201ENSMUST00000158378 108 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm25413-201ENSMUST00000158544 312 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 AC131085.1-201ENSMUST00000224746 656 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm26226-201ENSMUST00000082509 116 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.2□□□□□ -2.44
Scn11aQ9R053 Gm12370-201ENSMUST00000117809 604 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm23463-201ENSMUST00000122468 99 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC-0.21□□□□□ -2.44
Scn11aQ9R053 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm25185-201ENSMUST00000157754 96 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm37319-201ENSMUST00000193500 636 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm44825-201ENSMUST00000207557 150 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm44598-201ENSMUST00000207566 150 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC-0.21□□□□□ -2.44
Scn11aQ9R053 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
Scn11aQ9R053 Gm11410-201ENSMUST00000120053 1143 ntBASIC-0.22□□□□□ -2.44
Scn11aQ9R053 Gm24598-201ENSMUST00000122510 74 ntBASIC-0.22□□□□□ -2.44
Scn11aQ9R053 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Scn11aQ9R053 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC-0.22□□□□□ -2.44
Scn11aQ9R053 Gm18703-201ENSMUST00000215318 333 ntBASIC-0.22□□□□□ -2.44
Scn11aQ9R053 AC157017.2-201ENSMUST00000218354 777 ntBASIC-0.22□□□□□ -2.44
Scn11aQ9R053 AC123062.1-201ENSMUST00000221287 481 ntBASIC-0.22□□□□□ -2.44
Scn11aQ9R053 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC-0.22□□□□□ -2.44
Scn11aQ9R053 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.22□□□□□ -2.44
Scn11aQ9R053 Gm13482-201ENSMUST00000119842 254 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 Mir3079-201ENSMUST00000175428 90 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 Gm24573-201ENSMUST00000175499 112 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 Gm45614-201ENSMUST00000209994 721 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 Gm45438-201ENSMUST00000210242 564 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 AC172027.1-201ENSMUST00000217659 337 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 AC167202.1-201ENSMUST00000219027 331 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 Gm26265-201ENSMUST00000083277 135 ntBASIC-0.22□□□□□ -2.45
Scn11aQ9R053 Gm22678-201ENSMUST00000116974 101 ntBASIC-0.23□□□□□ -2.45
Scn11aQ9R053 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC-0.23□□□□□ -2.45
Scn11aQ9R053 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC-0.23□□□□□ -2.45
Scn11aQ9R053 Gm28435-201ENSMUST00000185496 108 ntBASIC-0.23□□□□□ -2.45
Scn11aQ9R053 Gm28560-201ENSMUST00000186091 315 ntBASIC-0.23□□□□□ -2.45
Scn11aQ9R053 Gm28334-201ENSMUST00000186653 315 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms