Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm25012-201ENSMUST00000158396 164 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Mir7016-201ENSMUST00000184308 72 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm20257-202ENSMUST00000188643 130 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm23462-201ENSMUST00000083264 104 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm13439-201ENSMUST00000117541 409 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm23589-201ENSMUST00000157660 105 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm23381-201ENSMUST00000157676 94 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm23548-201ENSMUST00000158963 106 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm25996-201ENSMUST00000175393 117 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm22800-201ENSMUST00000175627 94 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm23793-201ENSMUST00000179396 117 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Mir6901-201ENSMUST00000185062 62 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm27959-201ENSMUST00000185172 111 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm2829-201ENSMUST00000213121 499 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Mir322-201ENSMUST00000083484 95 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm25651-201ENSMUST00000083782 119 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.2□□□□□ -2.06
Cpsf3Q9QXK7 Gm26077-201ENSMUST00000104064 123 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm5396-201ENSMUST00000121222 532 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm25392-201ENSMUST00000157335 297 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm22316-201ENSMUST00000158012 216 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm24726-201ENSMUST00000158232 121 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm25368-201ENSMUST00000158847 131 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm23342-201ENSMUST00000158958 115 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm20462-201ENSMUST00000172623 408 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm25956-201ENSMUST00000175115 217 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm29604-201ENSMUST00000187176 163 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Trbv18-201ENSMUST00000194256 294 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm38041-201ENSMUST00000194445 661 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm24765-201ENSMUST00000083691 103 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm23041-201ENSMUST00000083868 106 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cpsf3Q9QXK7 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm14624-201ENSMUST00000117746 192 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm13518-201ENSMUST00000120018 233 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm16328-201ENSMUST00000126985 196 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm24737-201ENSMUST00000158861 100 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm21827-201ENSMUST00000178247 423 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm23731-201ENSMUST00000083749 107 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Cpsf3Q9QXK7 Gm26500-201ENSMUST00000101867 106 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm15215-201ENSMUST00000117773 489 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm25543-201ENSMUST00000122678 312 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm25460-201ENSMUST00000157954 127 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm23024-201ENSMUST00000158770 292 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm24573-201ENSMUST00000175499 112 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm22264-201ENSMUST00000178200 107 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Mir7226-201ENSMUST00000184953 60 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Cpsf3Q9QXK7 Gm22021-201ENSMUST00000104353 107 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm25848-201ENSMUST00000116790 144 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm14980-201ENSMUST00000121247 736 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm15365-201ENSMUST00000122392 300 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm22727-201ENSMUST00000158090 116 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm22085-201ENSMUST00000158344 110 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm17100-201ENSMUST00000168963 272 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Mir7217-201ENSMUST00000200304 62 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Cpsf3Q9QXK7 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.15□□□□□ -2.06
Cpsf3Q9QXK7 Gm25485-201ENSMUST00000104120 132 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Mir669d-201ENSMUST00000104644 121 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 169.1 ms