Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Gm20656-201ENSMUST00000176925 518 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Gm23523-201ENSMUST00000180190 107 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Gm27493-201ENSMUST00000184128 78 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Mir6993-201ENSMUST00000184912 65 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Gm5899-201ENSMUST00000071770 270 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Mir221-201ENSMUST00000083488 95 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Trem1Q9JKE2 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm14355-201ENSMUST00000117352 264 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm12351-201ENSMUST00000118727 292 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm14364-201ENSMUST00000129209 267 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm25914-201ENSMUST00000157618 153 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm25371-201ENSMUST00000158162 101 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm23208-201ENSMUST00000158666 127 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm23339-201ENSMUST00000158962 139 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Traj60-201ENSMUST00000167781 54 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm24390-201ENSMUST00000179578 62 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm29037-201ENSMUST00000189092 313 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm29350-201ENSMUST00000189141 541 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm28926-201ENSMUST00000191063 680 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm19901-201ENSMUST00000192191 495 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm45013-201ENSMUST00000206883 178 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm45315-201ENSMUST00000209283 333 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.31□□□□□ -2.2
Trem1Q9JKE2 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Mir701-201ENSMUST00000102208 109 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm13457-201ENSMUST00000117885 267 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm6444-201ENSMUST00000119611 458 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm13992-201ENSMUST00000120558 156 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm8121-201ENSMUST00000153583 499 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm23390-201ENSMUST00000157393 106 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm24901-201ENSMUST00000158125 110 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm22663-201ENSMUST00000158721 102 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm24668-201ENSMUST00000158935 104 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm22308-201ENSMUST00000177609 107 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Mir7679-201ENSMUST00000183379 63 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm28912-201ENSMUST00000189001 234 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm19441-201ENSMUST00000221545 330 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Trem1Q9JKE2 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm24068-201ENSMUST00000104513 132 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm25054-201ENSMUST00000157370 97 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm24780-201ENSMUST00000157635 143 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm22164-201ENSMUST00000158413 106 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm26501-201ENSMUST00000178307 107 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm23963-201ENSMUST00000179603 77 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm34139-201ENSMUST00000196166 294 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Gm25586-201ENSMUST00000082499 112 ntBASIC1.29□□□□□ -2.2
Trem1Q9JKE2 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Mir1193-201ENSMUST00000116761 121 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm27510-201ENSMUST00000158214 64 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm22665-201ENSMUST00000158720 275 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm16038-201ENSMUST00000159317 193 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm17100-201ENSMUST00000168963 272 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm24084-201ENSMUST00000175173 137 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm25253-201ENSMUST00000179958 107 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm29661-201ENSMUST00000186781 315 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm29308-201ENSMUST00000188863 315 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm44844-201ENSMUST00000207242 336 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trem1Q9JKE2 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm24623-201ENSMUST00000082616 194 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm26493-201ENSMUST00000083155 136 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.28□□□□□ -2.2
Trem1Q9JKE2 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Trem1Q9JKE2 Gm26396-201ENSMUST00000104093 132 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm26249-201ENSMUST00000116708 118 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm25491-201ENSMUST00000158733 308 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm9830-201ENSMUST00000178509 357 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm23860-201ENSMUST00000179446 132 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28110-201ENSMUST00000185782 315 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms