Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm24615-201ENSMUST00000083268 113 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm23453-201ENSMUST00000083326 106 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm13396-201ENSMUST00000120617 271 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm11389-201ENSMUST00000121407 430 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm22817-201ENSMUST00000157448 356 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm23967-201ENSMUST00000175062 78 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm27326-201ENSMUST00000183504 95 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm27421-201ENSMUST00000184729 167 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm37089-201ENSMUST00000195616 129 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm44491-201ENSMUST00000196794 96 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm43739-201ENSMUST00000198294 307 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm10264-201ENSMUST00000220589 429 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm20102-201ENSMUST00000222445 220 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm22508-201ENSMUST00000082772 110 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Trem3Q9JKE1 Gm24579-201ENSMUST00000103964 144 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm7916-201ENSMUST00000120325 456 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm14989-201ENSMUST00000120497 207 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm24154-201ENSMUST00000175261 130 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm29661-201ENSMUST00000186781 315 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm29308-201ENSMUST00000188863 315 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm42570-201ENSMUST00000195937 292 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm42805-201ENSMUST00000196158 276 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm43114-201ENSMUST00000198298 343 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm25636-201ENSMUST00000082666 133 ntBASIC0.56□□□□□ -2.32
Trem3Q9JKE1 Gm23766-201ENSMUST00000103894 80 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm12806-201ENSMUST00000119384 268 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm22477-201ENSMUST00000122569 316 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm22597-201ENSMUST00000157602 80 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm25451-201ENSMUST00000177832 121 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm23267-201ENSMUST00000178490 132 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Trbv22-201ENSMUST00000191697 291 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm37399-201ENSMUST00000195224 416 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm44011-201ENSMUST00000203336 394 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm8125-201ENSMUST00000216602 738 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm25851-201ENSMUST00000082794 107 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm23503-201ENSMUST00000083903 107 ntBASIC0.55□□□□□ -2.32
Trem3Q9JKE1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm25706-201ENSMUST00000157828 247 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Mir3061-201ENSMUST00000175129 91 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm27420-201ENSMUST00000183823 79 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm42164-201ENSMUST00000198881 379 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm44870-201ENSMUST00000207291 357 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Trem3Q9JKE1 Gm23422-201ENSMUST00000102000 107 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm25377-201ENSMUST00000104334 129 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm13457-201ENSMUST00000117885 267 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm23034-201ENSMUST00000158001 147 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm25011-201ENSMUST00000158398 126 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm34073-201ENSMUST00000195736 212 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm5010-201ENSMUST00000213131 260 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm18703-201ENSMUST00000215318 333 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm40810-201ENSMUST00000219149 253 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm9795-201ENSMUST00000062156 693 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Mir196b-201ENSMUST00000083509 85 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Mir465-201ENSMUST00000093563 74 ntBASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
Trem3Q9JKE1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm22831-201ENSMUST00000102473 109 ntBASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm23329-201ENSMUST00000157415 108 ntBASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm23106-201ENSMUST00000157554 101 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms