Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm14566-201ENSMUST00000118915 321 ntBASIC-0.54□□□□□ -2.5
Smco4Q9JIS3 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.54□□□□□ -2.5
Smco4Q9JIS3 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC-0.54□□□□□ -2.5
Smco4Q9JIS3 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.54□□□□□ -2.5
Smco4Q9JIS3 Gm44052-201ENSMUST00000203382 396 ntBASIC-0.54□□□□□ -2.5
Smco4Q9JIS3 Gm44655-201ENSMUST00000207768 423 ntBASIC-0.54□□□□□ -2.5
Smco4Q9JIS3 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.54□□□□□ -2.5
Smco4Q9JIS3 Gm3563-201ENSMUST00000172963 1628 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm29022-201ENSMUST00000190702 225 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm37727-201ENSMUST00000191637 819 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm7443-201ENSMUST00000206355 378 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 Gm25357-201ENSMUST00000082745 72 ntBASIC-0.55□□□□□ -2.5
Smco4Q9JIS3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm15807-201ENSMUST00000119880 1128 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm6985-201ENSMUST00000121255 271 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm15878-201ENSMUST00000127561 306 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm20438-201ENSMUST00000174441 329 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.56□□□□□ -2.5
Smco4Q9JIS3 Gm25898-201ENSMUST00000158303 106 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Gm26435-201ENSMUST00000179026 107 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Gm23410-201ENSMUST00000179967 107 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Gm22307-201ENSMUST00000180019 107 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Gm27668-201ENSMUST00000184188 120 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Mir6985-201ENSMUST00000184641 61 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Mir6394-201ENSMUST00000184738 99 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Gm35262-201ENSMUST00000215133 267 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 AC154257.2-201ENSMUST00000224166 340 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Gm23814-201ENSMUST00000083230 102 ntBASIC-0.57□□□□□ -2.5
Smco4Q9JIS3 Gm11859-201ENSMUST00000118099 455 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm12102-201ENSMUST00000118251 604 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm23858-201ENSMUST00000158384 106 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm26405-201ENSMUST00000158495 100 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm24875-201ENSMUST00000158888 104 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm26238-201ENSMUST00000175538 117 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm37599-201ENSMUST00000193067 489 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm18747-201ENSMUST00000198129 648 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm44488-201ENSMUST00000199467 119 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 AC126554.1-201ENSMUST00000222161 271 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 AC159885.1-201ENSMUST00000222221 199 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Gm23846-201ENSMUST00000083835 107 ntBASIC-0.58□□□□□ -2.5
Smco4Q9JIS3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
Smco4Q9JIS3 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.59□□□□□ -2.5
Smco4Q9JIS3 Gm23120-201ENSMUST00000157654 287 ntBASIC-0.59□□□□□ -2.5
Smco4Q9JIS3 Gm27313-201ENSMUST00000183500 142 ntBASIC-0.59□□□□□ -2.5
Smco4Q9JIS3 Mir703-201ENSMUST00000197105 109 ntBASIC-0.59□□□□□ -2.5
Smco4Q9JIS3 AC154636.2-201ENSMUST00000222538 161 ntBASIC-0.59□□□□□ -2.5
Smco4Q9JIS3 Mir214-201ENSMUST00000083582 110 ntBASIC-0.59□□□□□ -2.5
Smco4Q9JIS3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.5
Smco4Q9JIS3 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm14917-201ENSMUST00000118872 2105 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm22226-201ENSMUST00000157355 109 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm26150-201ENSMUST00000157426 151 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm25371-201ENSMUST00000158162 101 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Mir7062-201ENSMUST00000185038 66 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm38395-201ENSMUST00000199904 830 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 AC112274.2-201ENSMUST00000218436 170 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm46997-201ENSMUST00000222108 217 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 AC151833.1-201ENSMUST00000227752 574 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm23939-201ENSMUST00000082880 133 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm25257-201ENSMUST00000083907 110 ntBASIC-0.6□□□□□ -2.51
Smco4Q9JIS3 Gm7429-201ENSMUST00000118664 348 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm24382-201ENSMUST00000122698 107 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm23390-201ENSMUST00000157393 106 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm22389-201ENSMUST00000158193 301 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm20613-201ENSMUST00000175828 345 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm27522-201ENSMUST00000183949 230 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Mir191-201ENSMUST00000196210 74 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm44429-201ENSMUST00000203542 186 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 AC120540.1-201ENSMUST00000221879 324 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 AC154552.7-201ENSMUST00000222824 156 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm24536-201ENSMUST00000083144 107 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Snord85-201ENSMUST00000083262 73 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm45263-201ENSMUST00000210377 1375 ntBASIC-0.61□□□□□ -2.51
Smco4Q9JIS3 Gm14713-201ENSMUST00000122362 686 ntBASIC-0.62□□□□□ -2.51
Smco4Q9JIS3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC-0.62□□□□□ -2.51
Smco4Q9JIS3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms