Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm23867-201ENSMUST00000122649 274 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm26406-201ENSMUST00000158503 124 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm24348-201ENSMUST00000158710 130 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm23190-201ENSMUST00000180307 64 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm27399-201ENSMUST00000184250 78 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm28257-201ENSMUST00000185244 463 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm29490-201ENSMUST00000190923 342 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm43035-201ENSMUST00000197626 517 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Mir7227-201ENSMUST00000200408 59 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm43914-201ENSMUST00000203592 594 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm44903-201ENSMUST00000206840 130 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
Trim54Q9ERP3 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm7209-201ENSMUST00000122339 333 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm25625-201ENSMUST00000157221 96 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm22227-201ENSMUST00000157356 259 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm26186-201ENSMUST00000157689 125 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm24210-201ENSMUST00000158263 133 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm22114-201ENSMUST00000177756 107 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm24308-201ENSMUST00000177773 114 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm25457-201ENSMUST00000179509 107 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm29665-201ENSMUST00000191457 528 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm2829-201ENSMUST00000213121 499 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm26447-201ENSMUST00000082448 129 ntBASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim54Q9ERP3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Mir872-201ENSMUST00000104728 81 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm25543-201ENSMUST00000122678 312 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm23759-201ENSMUST00000158351 268 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm24225-201ENSMUST00000158825 98 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm7592-201ENSMUST00000160674 627 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Mir7661-201ENSMUST00000197023 61 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm44429-201ENSMUST00000203542 186 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Mir32-201ENSMUST00000083610 70 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.65□□□□□ -1.99
Trim54Q9ERP3 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm13432-201ENSMUST00000118861 241 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm24892-201ENSMUST00000122747 104 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm24630-201ENSMUST00000122768 106 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm23600-201ENSMUST00000157260 71 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm23599-201ENSMUST00000157261 251 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Mir6353-201ENSMUST00000183596 113 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm28951-201ENSMUST00000190742 313 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm45296-201ENSMUST00000209625 205 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm24152-201ENSMUST00000082764 163 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim54Q9ERP3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.64□□□□□ -1.99
Trim54Q9ERP3 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm23941-201ENSMUST00000101953 107 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm23551-201ENSMUST00000116852 121 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm14215-201ENSMUST00000120578 221 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm24501-201ENSMUST00000158452 62 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm24771-201ENSMUST00000158508 137 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Mir6399-201ENSMUST00000184050 84 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm29147-201ENSMUST00000186846 315 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm29227-201ENSMUST00000187139 315 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm29034-201ENSMUST00000188099 315 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm28744-201ENSMUST00000189939 340 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm28160-201ENSMUST00000191229 315 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm36891-201ENSMUST00000191995 655 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm37129-201ENSMUST00000195791 315 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm43250-201ENSMUST00000196536 273 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm43978-201ENSMUST00000203491 451 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm18991-201ENSMUST00000209225 746 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm26265-201ENSMUST00000083277 135 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms