Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Snord38a-201ENSMUST00000083746 71 ntBASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Lima1Q9ERG0 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Mir743b-201ENSMUST00000104751 77 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Gm25956-201ENSMUST00000175115 217 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Mir3098-201ENSMUST00000175416 87 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Mir7675-201ENSMUST00000184262 58 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Gm27419-201ENSMUST00000184576 109 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Mir691-201ENSMUST00000199719 78 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Gm43199-201ENSMUST00000200019 307 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Gm23093-201ENSMUST00000083450 102 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Lima1Q9ERG0 BC022960-201ENSMUST00000119987 1815 ntBASIC1.1□□□□□ -2.23
Lima1Q9ERG0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm8121-201ENSMUST00000153583 499 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm20438-201ENSMUST00000174441 329 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm27624-201ENSMUST00000185047 177 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm28995-201ENSMUST00000186625 261 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm29350-201ENSMUST00000189141 541 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm37599-201ENSMUST00000193067 489 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm18546-201ENSMUST00000197245 676 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Mir3087-201ENSMUST00000199405 56 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm44142-201ENSMUST00000203358 311 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm44336-201ENSMUST00000203696 468 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Gm45375-201ENSMUST00000210338 280 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.09□□□□□ -2.23
Lima1Q9ERG0 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24596-201ENSMUST00000122504 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24584-201ENSMUST00000157972 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25211-201ENSMUST00000177553 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24540-201ENSMUST00000177627 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25256-201ENSMUST00000177746 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22822-201ENSMUST00000177941 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Rnu6-201ENSMUST00000178023 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23151-201ENSMUST00000178061 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25245-201ENSMUST00000178139 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24753-201ENSMUST00000178183 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25829-201ENSMUST00000178275 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22092-201ENSMUST00000178290 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24486-201ENSMUST00000178420 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23217-201ENSMUST00000178482 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm26245-201ENSMUST00000178491 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23610-201ENSMUST00000178659 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23092-201ENSMUST00000178688 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25709-201ENSMUST00000178844 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25547-201ENSMUST00000178877 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25312-201ENSMUST00000178972 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24722-201ENSMUST00000179017 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22969-201ENSMUST00000179018 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25101-201ENSMUST00000179057 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm26378-201ENSMUST00000179093 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24873-201ENSMUST00000179101 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23934-201ENSMUST00000179111 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22623-201ENSMUST00000179244 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25737-201ENSMUST00000179274 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22618-201ENSMUST00000179376 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24182-201ENSMUST00000179419 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24242-201ENSMUST00000179440 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24863-201ENSMUST00000179499 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25064-201ENSMUST00000179535 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm26295-201ENSMUST00000179690 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23712-201ENSMUST00000179713 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22823-201ENSMUST00000179754 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22360-201ENSMUST00000179775 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24978-201ENSMUST00000179782 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24967-201ENSMUST00000179791 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25173-201ENSMUST00000179794 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24870-201ENSMUST00000179897 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22288-201ENSMUST00000179904 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22645-201ENSMUST00000180010 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm24565-201ENSMUST00000180099 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23805-201ENSMUST00000180129 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23512-201ENSMUST00000180237 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm25327-201ENSMUST00000180263 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm26058-201ENSMUST00000180294 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm22418-201ENSMUST00000180326 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm43245-201ENSMUST00000197603 468 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23629-201ENSMUST00000082465 107 ntBASIC1.08□□□□□ -2.24
Lima1Q9ERG0 Gm23924-201ENSMUST00000082474 108 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms