Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.91□□□□□ -2.1
Scn4aQ9ER60 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm25853-201ENSMUST00000082793 132 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm25475-201ENSMUST00000082825 180 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm25896-201ENSMUST00000083713 136 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm15443-201ENSMUST00000118947 820 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm12748-201ENSMUST00000120763 504 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm15365-201ENSMUST00000122392 300 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm23411-201ENSMUST00000157988 62 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Mir6950-201ENSMUST00000184438 73 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm28343-201ENSMUST00000185386 112 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Scn4aQ9ER60 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm9318-201ENSMUST00000222444 438 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Scn4aQ9ER60 Gm26154-201ENSMUST00000102339 96 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm12779-201ENSMUST00000121496 143 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm37771-201ENSMUST00000193121 265 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Trbv6-201ENSMUST00000193743 276 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm44336-201ENSMUST00000203696 468 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm44182-201ENSMUST00000204052 115 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm43865-201ENSMUST00000204721 127 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm25559-201ENSMUST00000157182 74 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm22483-201ENSMUST00000157986 274 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm27957-201ENSMUST00000184054 127 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm10193-201ENSMUST00000188288 231 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm42925-201ENSMUST00000197359 285 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Gm19441-201ENSMUST00000221545 330 ntBASIC1.89□□□□□ -2.11
Scn4aQ9ER60 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Gm24304-201ENSMUST00000177635 107 ntBASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Scn4aQ9ER60 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm25052-201ENSMUST00000122661 158 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Mir7667-201ENSMUST00000183866 63 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm42739-201ENSMUST00000200687 226 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Scn4aQ9ER60 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm20102-201ENSMUST00000222445 220 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm14774-201ENSMUST00000117857 536 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm26393-201ENSMUST00000157625 129 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Gm27588-201ENSMUST00000185096 263 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Mir10a-201ENSMUST00000083585 110 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Mir29c-201ENSMUST00000083614 88 ntBASIC1.87□□□□□ -2.11
Scn4aQ9ER60 Mir701-201ENSMUST00000102208 109 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Snord11-201ENSMUST00000158468 84 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Gm25901-201ENSMUST00000158494 130 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Gm24813-201ENSMUST00000175310 84 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Gm38395-201ENSMUST00000199904 830 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Gm44794-201ENSMUST00000206550 411 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Gm44910-201ENSMUST00000208451 396 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Gm26265-201ENSMUST00000083277 135 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.86□□□□□ -2.11
Scn4aQ9ER60 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Gm15010-201ENSMUST00000117153 407 ntBASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Gm45386-201ENSMUST00000210194 218 ntBASIC1.85□□□□□ -2.11
Scn4aQ9ER60 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.85□□□□□ -2.11
Scn4aQ9ER60 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.85□□□□□ -2.11
Scn4aQ9ER60 Gm22678-201ENSMUST00000116974 101 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm13577-201ENSMUST00000121365 205 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm23435-201ENSMUST00000157183 156 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm22136-201ENSMUST00000158751 268 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms