Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm26247-201ENSMUST00000116702 91 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm16327-201ENSMUST00000137146 228 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm25390-201ENSMUST00000157341 103 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm22532-201ENSMUST00000158822 140 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm22192-201ENSMUST00000175128 85 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm43220-201ENSMUST00000199299 282 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm24966-201ENSMUST00000082443 79 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm25632-201ENSMUST00000083112 85 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm26495-201ENSMUST00000083152 137 ntBASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Upf1Q9EPU0 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.65□□□□□ -1.82
Upf1Q9EPU0 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
Upf1Q9EPU0 Gm24892-201ENSMUST00000122747 104 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm25720-201ENSMUST00000157503 105 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm22382-201ENSMUST00000158185 130 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm25654-201ENSMUST00000158467 88 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm44476-201ENSMUST00000196225 91 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm42526-201ENSMUST00000198956 393 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm43746-201ENSMUST00000200028 317 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm42739-201ENSMUST00000200687 226 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Gm22978-201ENSMUST00000082607 160 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Snord47-201ENSMUST00000083034 77 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Upf1Q9EPU0 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Gm23911-201ENSMUST00000104596 134 ntBASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Gm13314-201ENSMUST00000118742 335 ntBASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Gm14922-201ENSMUST00000121131 163 ntBASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Trav20-201ENSMUST00000142754 347 ntBASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Upf1Q9EPU0 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm11204-201ENSMUST00000122438 147 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm25783-201ENSMUST00000122525 190 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm23231-201ENSMUST00000157299 104 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm24750-201ENSMUST00000157843 104 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm25834-201ENSMUST00000158916 101 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm25528-201ENSMUST00000180264 132 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm27470-201ENSMUST00000184070 210 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm34314-201ENSMUST00000203622 367 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm22973-201ENSMUST00000083298 191 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Upf1Q9EPU0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf1Q9EPU0 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Gm23257-201ENSMUST00000158322 132 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Gm27535-201ENSMUST00000183814 157 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Gm27761-201ENSMUST00000184091 131 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Gm28627-201ENSMUST00000186141 453 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf1Q9EPU0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Gm17067-202ENSMUST00000180131 123 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Gm43901-201ENSMUST00000203247 453 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Gm45907-201ENSMUST00000213023 193 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Gm30674-201ENSMUST00000214523 392 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf1Q9EPU0 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Mir471-201ENSMUST00000093596 67 ntBASIC3.61□□□□□ -1.83
Upf1Q9EPU0 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Upf1Q9EPU0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms